Shewanella sp. W3-18-1: Sputw3181_2568
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Entry
Sputw3181_2568 CDS
T00453
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_2568
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sputw3181_2568
Archaeal homologous recombinant proteins
Sputw3181_2568
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DUF3237
Motif
Other DBs
NCBI-ProteinID:
ABM25392
UniProt:
A0A6N3J6E6
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Position
complement(2926684..2927829)
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AA seq
381 aa
AA seq
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MKFIHTSDWHIGRQLHNQSLLDDQAFVLEQIIALADEHKVDAVIVAGDIYDRSIPPANAV
ALLDDVLNRLVHDLGLQVIMIAGNHDGHERLGFAAKQMAASGLHIIGPLSADIHPITLSS
SSGDVVFYPLPYAEPATVRQVFECEAASHEAAMTLLLEQVRQHDSQGLPKVVISHCFLDG
GSESESERPLSIGGADKISPTLFTEFDYVALGHLHGPQYKGAEHVRYSGSILKYSFSEQH
QHKSVTLVELSAQTPIKIRLLPLTSIRDVRILEGELATLLAQGKTDIKREDYLMVRLLDK
HAILDAMGKLRAVYPNVLHLERTGLMAGQQQVTLSRDHIKKGEMDMFRDFFSQVSGESLT
QAQQAVMDELLTKLHNEERQA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccacacctcggactggcacataggtcgtcaattacacaatcaatcacta
ctggatgatcaagcttttgtgctcgagcaaatcattgctttagcggatgaacacaaggtg
gatgccgtgattgtggcgggggatatttatgacagatcgattccgcctgcgaatgcggtt
gcgctgttagatgatgtgcttaaccgcttagtgcatgatttgggcctgcaagtcattatg
attgcgggtaaccacgatggtcacgagcgcttaggttttgcagcaaaacaaatggcggca
agtgggttacatattattgggcctttgagtgctgacattcatcccattactttatcgagt
tcaagcggtgatgtggtgttttatcccttgccctatgccgaacctgccacagtgcgccaa
gtttttgagtgtgaggcggcaagccatgaggccgcaatgacgctattgcttgaacaagta
cgccagcacgatagccaaggtttgccgaaagtggtgataagccattgttttttggatggt
ggcagtgagtcagaatctgagcggccactgagcattggtggcgccgataaaatatcgcca
acgctatttactgagtttgattatgtcgcccttggacatttgcacggaccgcaatacaaa
ggtgcagagcatgtgcgctactcaggatcgattttgaagtattcctttagcgaacaacat
caacataagtcggtgaccttagtcgaacttagcgcgcaaacgccgattaaaattcgtttg
ttaccattaacgtcaatacgcgatgtccgcatcttagaaggggagttagccacattactc
gcccaaggtaaaacggatatcaagcgtgaggactaccttatggtcagactccttgataaa
catgccattttagatgctatgggaaaattgagagccgtttaccctaatgtgctgcattta
gaacgaactggtctgatggcggggcagcaacaagttaccttgagccgagatcatatcaaa
aaaggcgagatggacatgttccgtgactttttctctcaagtatccggcgagtcattaaca
caagcgcagcaagctgtaatggatgaactcctgactaagctacacaatgaggagcgccaa
gcatga
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