Shewanella sp. W3-18-1: Sputw3181_2809
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Entry
Sputw3181_2809 CDS
T00453
Name
(GenBank) putative exonuclease, RdgC
KO
K03554
recombination associated protein RdgC
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_2809
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sputw3181_2809
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
ABM25626
UniProt:
A1RLT1
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All DBs
Position
3218040..3218954
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AA seq
304 aa
AA seq
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MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDISKFGFSNALGKKGSSLVHSAN
NRHLICATKEEKMLPGQVIKEALEEKVALIEDEENRKLAKKEKDALKDEIITSLLPRAFS
RRSQTRALILPELEMILVDSSSATKAEELLALLRKALGSLPVIPLSFKAPVESHLTEWLK
NGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVSALGGLE
ETQD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtggtttaaaaatcttactctttatcgttttaataaaccttttgccgtcgaaactgaa
gcacttgaaaccgcacttgcagatttcactttctccccatgctcaagccaagacatcagt
aaatttgggttttccaatgccttaggaaaaaaaggcagttccttggtacatagtgccaac
aatcgccatttaatttgtgcgactaaagaagaaaaaatgctcccaggccaagtcatcaag
gaagcacttgaagaaaaagtggctctcattgaggatgaagaaaatcgaaaactggcaaaa
aaagaaaaagatgctcttaaagatgaaattatcaccagtttgttacctcgggcattttca
cgccgtagccagactcgcgcactgattttaccagagctggaaatgatcctcgttgatagt
tcaagtgccactaaggccgaagaattattagcgttattacgtaaagctctcggcagtttg
ccagtgatccccttaagttttaaagcgcctgttgaatcccatttaaccgaatggttaaag
aatggcagtgcaccattaccctttgaaatgcaagatgaagcagagcttaaatcagaagca
gatgaaggtggcattgtacgttttaagcaacaggatctaaaagaagatgaagtgctcgct
cacttagcgacgggcaaacaagttcataaattagccctgcactttggtcaatccatcgcg
ctattgctgcaatcggatgctagcgtgaaacgtcttaaattctctgaagaatttagagcg
gggaacgatgaagtcggtactgatgatcctatggcacgtttagatgctgattttgcatta
atgggtagcgagttagttgccttaatgcacgcacttgtatcagcccttggcggactagaa
gaaacacaagactaa
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