Shewanella sp. W3-18-1: Sputw3181_2855
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Entry
Sputw3181_2855 CDS
T00453
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00500
Starch and sucrose metabolism
shw01100
Metabolic pathways
shw01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Sputw3181_2855
Enzymes [BR:
shw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Sputw3181_2855
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
ABM25672
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All DBs
Position
complement(3277929..3280136)
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AA seq
735 aa
AA seq
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MTARQIVTPLPATSIHLPFELAAGKPFPLGATVDDHGVNFALFSANATGVELCLFDDKGD
SEIYRIAFSEQTQQIWHCYVHGLKAGQLYGYRVYGLYEPQLGHRFNPYKLLQDPYARQLV
GLYQHHDANYGYELNNIHEDLSFSTLDNAAYVPKCKVVDIRSLMATAEIQPLARDFKPKP
LEQSIIYEMHLKGFTASHPTIDEKQRGTFAGLASQPAIDYLVELGVTCVELLPVQSFFTE
PFLLEKQLTNYWGYNSIGFFAPETSYLSSDDIGEFRVMVDALHGAGIEVILDVVYNHSAE
GSRLGPTFSFRGIDNLSYYRLHPNDKRFYINDTGCGNTLNINHPRMLQLVLDSLRYWVEV
MGVDGFRFDLAACLGREAYGFDPGSGFFDALLQDPILCHVKLIAEPWDIGPGGYQLGNFP
VAFSEWNDRYRDTMRRFWRGDHGMLPEFARRFHGSGDFFEHSGRPPAASINFLTSHDGFT
LKDLVSYTQRHNLANGEDNRDGHQENFSYHYGVEGPTSDPHILALRSRQQRNLLTTLFLS
QGVPMLLSGDEIGRTQLGNNNAYCQDNTLNWFDWSVAGMDKALLSFTQKLIALRKRFPLL
CAKRFIHEQLLAKPLEASGARLDWFSRQGEQMTKSLWSESMCRSLCVVLSGDLQGCRDGV
EIQQALLLMVNADDNPLVFTPPTLAHLSPWQCLIHTQLEMPSPLQAEPLDAQNSSMRYLL
EDRSLMLFYADFIRN
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaaggcaaatagtcacacctttgcctgcgacgagcattcatttgccatttgaa
cttgcggcaggaaaaccttttccattaggggcgaccgtcgatgatcatggcgttaatttc
gccttattttccgctaatgcaacaggggttgaactgtgcttatttgacgataaaggtgac
agtgaaatttatcgtattgcctttagtgagcaaacccagcagatatggcattgctatgta
catggtttaaaggcggggcaactctatggttatcgcgtttatggtctttatgagccgcag
cttgggcacagatttaatccctataaactgctgcaagatccctatgctcgccaattagtt
ggcttatatcaacaccatgatgctaactatggttatgagttaaataatatccatgaagat
ttatcattcagcaccttagacaacgcagcctatgtgcctaaatgtaaagtggtggatatt
cggtccttgatggcaacggctgaaatccagccgcttgcgcgcgactttaagcctaaaccg
ttagagcaaagcattatctatgagatgcaccttaagggatttacggcatcgcatccaaca
atagatgaaaagcagcggggtacttttgccggtttggcctcccagccagctattgattac
ttagttgaacttggagtgacctgcgttgaactgcttcctgtgcaatccttttttaccgaa
ccctttttgcttgaaaaacagttaactaactattggggctataacagcattggctttttt
gcacctgagaccagttacttatcttccgatgatataggcgagtttcgcgttatggtggat
gcactgcatggcgcaggcatagaagtcatcctggatgtggtctataaccacagtgcagaa
ggcagtcgactcggtcccacttttagttttcgtggtatcgataaccttagctattaccgt
ttgcacccaaatgataaacgcttttatatcaatgatactggatgtggcaacacgttaaat
atcaatcatccacgtatgttgcagttagtgctcgactctctgcgttactgggtcgaagtc
atgggagtagatggttttagattcgatttagccgcctgccttgggcgagaagcctatggc
tttgaccccggttcaggctttttcgatgcactgctgcaggatcctatcttgtgccatgtg
aagctgattgctgaaccttgggatattggtcccggcggttatcagttaggcaatttcccc
gtggcttttagtgaatggaatgacagatatcgggatacgatgcgacgcttttggcgcggc
gatcatggtatgttgcctgaatttgcgcggcgttttcatggctcgggggatttctttgaa
cacagtgggcgtccgccagctgccagcattaactttttaaccagccatgatggatttacc
ctaaaagatttagtgagttatacccagagacacaaccttgctaatggggaagataatcgg
gatggtcaccaagaaaacttcagttatcactatggcgttgaggggcctacctcagatccg
cacatcttagcgcttcgcagccgtcagcaacgcaatcttttgacgaccttatttttatcc
caaggtgtacctatgttgcttagtggtgacgaaattggccgcacccagttagggaacaat
aacgcctactgccaagacaatacgctcaattggttcgattggtcggtggccgggatggat
aaagcactgttaagttttactcaaaagttaattgccctgcgtaaacgcttccccctcttg
tgtgctaaacgctttatccatgagcagttactcgctaaacctttagaagcatccggtgcc
cgtttagattggtttagccgtcaaggtgaacaaatgactaagagtctgtggagtgaatcc
atgtgccgtagcctctgtgttgttttgtccggtgatttacagggctgtcgtgatggcgtt
gagatccagcaagcactgctattaatggtcaatgccgatgataatcccttggtctttaca
ccgcccacactcgcccatttaagtccgtggcaatgtcttatccatacccaattagagatg
ccatccccgcttcaagctgagccgctggatgctcagaactcatcgatgagatacctgcta
gaagatcgcagtcttatgctgttttatgctgattttataaggaattaa
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