KEGG   Shewanella sp. W3-18-1: Sputw3181_3048
Entry
Sputw3181_3048    CDS       T00453                                 
Name
(GenBank) Peptidoglycan-binding domain 1 protein
  KO
K02450  general secretion pathway protein A
Organism
shw  Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:shw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:shw02044]
    Sputw3181_3048
Secretion system [BR:shw02044]
 Type II secretion system
  General secretion pathway protein
   Sputw3181_3048
SSDB
Motif
Pfam: AAA_22 AAA_16 PG_binding_1 SLFN-g3_helicase AAA_19 AAA_5 AAA_14 GspA_C39-like AAA_30 AAA nSTAND3 Mg_chelatase ABC_tran AAA_7 TsaE Sigma54_activ_2 TrwB_AAD_bind AAA_33 TniB NACHT AAA_25 Sigma54_activat cobW DUF5906 AAA_18
Other DBs
NCBI-ProteinID: ABM25865
UniProt: A0A6N3J7A2
LinkDB
Position
complement(3476732..3478411)
AA seq 559 aa
MYKAFYGLSDNPFSIAPNPHYLFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS
RCLLGQLPDNTDTAFILNPSLTELELLATLCDELKIRYGENPTLKQLTDHLSHFLLANHE
KGRNTVLIIDEAQHLRPEVLEQLRLLTNLETDTKKLLQVILIGQPELQLLLKRQELRQLA
QRITARYHLLPLNEDEIALYVLHRLQVAGRFEPLFTRKAIKVLQKYSGGIPRLINLLCER
ALMAGYAQSRVPIDHRMVRQAAAEVLGEEEKQQNPYLWPTAIVATLAIAFGVSYWLFTLN
QSTMSVQASTAESQPSQNVSIAAQDIKDVNSETQLTQALIKQPSTQATIVKPDPSQRVLN
EAINQSRQIDTAFAGLFSVWGKVPFKGLTACQSAIEQGLSCYQQQGNWMSLTRLNYPAVV
YLVDDNQQDFYGAVLAVDGEQLLMQLGEQQLWVDRAWFNQHFSGTFEILWQAPSLPMMEI
SQKSSVGQLQWLENALAHVSNRNARRVTHFDLKLENDLKAFQSQHGLKADGIAGNQTLVR
LNLYLSEQGPRLTDNGAHG
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgtacaaggccttttatggactcagcgataaccctttttcaattgcacccaatccccat
tatttatttttgagtgataggcaccgagaagccctagcacatcttacctacggtttgggt
gaaaccggtggttttgtgctgttaacaggtgaagtggggacgggtaaaacaacggtgtct
cgttgtttgcttgggcaattgcccgataataccgatactgcatttatcctgaatccctca
ctgactgaattggagttacttgccactctttgcgatgagttgaagatccgttatggagaa
aatccaacacttaagcagttgaccgatcatttaagtcattttttactcgcgaaccatgag
aaaggtcgtaatacggtactcattattgatgaggctcagcacctacgacctgaagtgtta
gaacaattacggttgctcacaaatctggagacagataccaaaaaattattgcaggtgatt
ttgattggtcaacctgagctgcaattgttactaaaacgtcaagaattacgacagctggca
cagcgaattactgctcgttatcatttattacctctaaatgaagatgaaattgcactttat
gtgttgcaccgcttacaggtcgccggacgatttgaaccactgtttacccgtaaagcgatt
aaggtattacagaaatatagcggggggattccacgcctaattaacttgctctgtgaacgt
gcgttaatggctggttatgcacaatcccgagtgccaattgatcatcgtatggtgaggcaa
gcagcggctgaagtgttaggtgaggaagaaaaacaacagaatccatacctctggccaacg
gctattgttgcgactctcgccattgcctttggcgtatcctattggttgtttaccctcaat
caaagcactatgagcgttcaagcttccaccgcagagagtcaaccttctcaaaatgttagt
attgctgctcaagacataaaagatgtaaatagtgaaacccagttaactcaggctttaatc
aaacaaccgagtacccaagctacaatcgtaaaacctgatcccagccaacgagtcttaaat
gaggcaataaaccaaagtcgtcaaattgatactgcctttgctggattgttcagtgtttgg
gggaaagtgccttttaaagggctaacagcctgccaatcagccattgaacaagggctttcc
tgttaccaacaacagggaaattggatgtcccttacacggttaaattatcctgcagtagta
tatttagtagatgataatcaacaggatttttacggtgcagtgcttgctgttgatggtgaa
caattacttatgcaattgggtgagcagcaactttgggttgatagggcatggtttaatcaa
cattttagcggtacctttgagattttatggcaggcacctagcctacctatgatggagatc
agccagaagtcgagcgtaggacaacttcagtggttggagaatgcgcttgcccatgtgagt
aatcgtaatgcgagaagggtaacgcactttgatcttaaattagaaaatgatctcaaagct
tttcaaagccaacatggcttgaaagctgatggtattgctggcaaccaaacattagtgaga
ctgaatttgtatttaagtgagcaaggcccgcgtttaaccgataatggagcacatggctaa

DBGET integrated database retrieval system