Shewanella sp. W3-18-1: Sputw3181_3146
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Entry
Sputw3181_3146 CDS
T00453
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shw03009
]
Sputw3181_3146
Enzymes [BR:
shw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Sputw3181_3146
Ribosome biogenesis [BR:
shw03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Sputw3181_3146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SNF5
Motif
Other DBs
NCBI-ProteinID:
ABM25961
UniProt:
A0A6N3J7I3
LinkDB
All DBs
Position
complement(3601020..3601730)
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AA seq
236 aa
AA seq
DB search
MQSKRGRLDRYLSAKMQMPRKLVRDLLLSGRVQVDGQIVKEMDRQVDEFSHIQLDDQVLQ
ANTPVYMMLHKPVGVVSATKDNQHKTVIDLLDNEYRHELHIAGRLDLNSSGLLLLTNDSR
WSEALMSPTEKVDKVYRVTLANPLTHDYVTAFAEGMYFGFEDITTQPAKLVILDSHLAEV
TLKEGKYHQIKRMFGRFRNPVIGLHRLSIGDIVLDEQLQPGESRTLTAAEIACIKI
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctaaacgtggtcgactcgatagatatttaagcgcgaagatgcagatgccccgc
aaattagtgcgtgatttactgctatctgggcgtgtgcaagtggatgggcagattgttaaa
gagatggacagacaagtggatgagttttcccatatccaactcgatgatcaagttttacag
gccaatactccggtttatatgatgttacataagcctgttggcgtggtgagtgcgactaag
gataaccaacataagacggtaatcgacctacttgataatgaatatcggcacgaattgcat
atcgcgggtcgactggatttaaattcttctggattattgctcctgactaacgatagtcga
tggtccgaggcgcttatgtcaccaacagaaaaagtcgataaagtgtatcgtgtgacgctt
gcaaatccactaacacatgattatgtaacagcatttgctgaaggtatgtattttggtttt
gaagatatcacgactcaacccgcaaaactggttatcctcgattcccatttggctgaagtg
acgttaaaagaaggtaaataccatcaaataaagcgtatgtttggccgatttcgtaatcct
gtgattggtctacatcggttatccattggtgacatagtgttagatgaacagcttcaacct
ggtgagagtcgaactctcaccgcggctgagattgcttgcataaaaatctaa
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