Shewanella sp. W3-18-1: Sputw3181_3190
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Entry
Sputw3181_3190 CDS
T00453
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sputw3181_3190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_3190
Enzymes [BR:
shw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sputw3181_3190
DNA repair and recombination proteins [BR:
shw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sputw3181_3190
Prokaryotic type
Sputw3181_3190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABM26005
UniProt:
A0A6N3J7N9
LinkDB
All DBs
Position
complement(3644923..3645588)
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AA seq
221 aa
AA seq
DB search
MTFSTWQDFIDNQRAQTYYQELIAFVNKERQLGKVIYPPKEDVFNAFKMTPLENVRVVLI
GQDPYHGPNQAHGLCFSVRRGIKPPPSLANMYKELVNDIPGFHIPDHGDLSYWAEQGILM
LNTVLTVEQGQAHSHANAGWEIFTTAVLKLLNEQSRPIIFVLWGSHAIKKGAVITAPQHQ
VLCGPHPSPLSAYRGFFGCGHFSKVNQLLTARGEIPIQWQV
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgactttttcaacttggcaggattttattgataaccagcgtgcacaaacttactaccaa
gagttaatcgcatttgtgaacaaagaacgacaattgggcaaagtcatttatcctcctaaa
gaggatgtttttaacgctttcaagatgactccccttgaaaatgttcgagtcgtactcatt
ggacaagatccttaccatggcccaaatcaggcgcatggattatgcttctccgttaggcgt
ggtattaagccaccaccatcattggctaatatgtataaagaactggttaatgatattcct
ggtttccatattcctgaccatggtgatttaagctactgggccgaacaagggatcttaatg
ctcaatacggtattaacagttgagcaaggccaagctcactcacatgccaatgctggctgg
gagatatttactaccgcagtattaaaattgttaaacgagcaatctaggccgattattttt
gtgctgtggggtagccatgcaataaagaaaggtgcagtcattactgcgccgcagcatcaa
gtgttgtgtgggccgcatccatcccctttatccgcctatcgtggattttttggttgtggg
catttttcaaaggtgaaccaattgctgacagcgcggggtgaaatccctatacagtggcaa
gtttaa
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