KEGG   Shewanella sp. W3-18-1: Sputw3181_3281
Entry
Sputw3181_3281    CDS       T00453                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
shw  Shewanella sp. W3-18-1
Pathway
shw03410  Base excision repair
shw03430  Mismatch repair
shw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Sputw3181_3281
   03430 Mismatch repair
    Sputw3181_3281
   03440 Homologous recombination
    Sputw3181_3281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shw03400]
    Sputw3181_3281
DNA repair and recombination proteins [BR:shw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Sputw3181_3281
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Sputw3181_3281
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Sputw3181_3281
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: ABM26095
UniProt: A0A6N3J7W9
LinkDB
Position
complement(3745221..3746975)
AA seq 584 aa
MPRFNESLSPLIHKIVRRPTVDDSHLPVHLPPLLKQLYARRGVMPHECELALQGLLRPET
MKGLVEAAAIIADAMQANKSILIVGDFDADGATSTSVCMLALRMMGALKVDYLIPNRFDY
GYGLSPEIVAVAASKQAELLITVDNGISSIEGVAAAKAFGMQVIITDHHLPGHELPAADA
IVNPNQPGCPFASKSIAGVGVAFYLMTALRAELRTRNWYQSRGIAEPNLGTLLDIVALGT
VADVVSLDANNRILVEAGLQRVRAGRCRVGITALLEVAKRNPARILASDFGFAVGPRLNA
AGRLDEMALGVETLLCEDIMYARRMAAELDGLNQERRELEVGMQQEALKSLEHLKLNEAE
LPWGIALFQEDWHQGVIGILASRIKDKYHRPVIAFADAGNGEIKGSARSIKGLHMRDLLE
LVNTRHPGLIIKFGGHAMAAGLSLKAGSFATFAKAYDDAVREQLKPELLTGELWSDGELT
PTELNLEIAQLLRNAGPWGQAFEEPLFDGYFKIVQQRLVGERHLKLVLETQCGTVMLDAI
AFNVDLHTWPDATINHARIVYKLDVNEYRGNFSLQLMVEQIEAM
NT seq 1755 nt   +upstreamnt  +downstreamnt
ttgccacgatttaatgagagtttgagtcccttgatccataagatagtccgtcgcccaacc
gttgatgacagtcatttacccgtccatcttccacctctgttaaaacagctttatgctcgc
cgaggtgtcatgccccatgaatgcgagcttgcgcttcaagggcttttacgcccagaaacg
atgaaaggcttggttgaagctgcagccattattgctgatgcgatgcaggcgaataagtcg
attttaatcgtgggtgactttgatgccgacggtgcaacatcaacgagtgtgtgtatgtta
gcgctacggatgatgggcgctctgaaagtggattatttgatccccaatcgctttgattat
ggttatggactcagccctgaaattgtcgcggttgccgcctcgaaacaggctgaactatta
attacagttgataatggtatttcctcaatagaaggtgttgcagcggctaaagcctttggt
atgcaagtgattattaccgaccatcatttgcctggccatgaattaccggctgccgatgcg
atagtgaaccctaaccaaccgggctgtccatttgccagtaaatcgattgccggtgttggc
gttgccttttatttgatgacggcgctaagggcagaacttcggacgcgaaactggtatcaa
tcccgcggcatcgctgagcccaatttaggcacactgctcgatattgtcgccctaggcact
gttgccgatgtggtatcactcgatgccaataatcgaattttggtcgaggcgggactgcag
cgcgtgcgagccggacgttgccgtgtagggattaccgcgctgcttgaggtggctaagcga
aatccggcgcgcattctcgcatctgactttggttttgccgtggggccaaggcttaatgct
gcgggtcgtctcgatgaaatggcgcttggggtcgaaacgctactttgtgaagatataatg
tacgctcggcgtatggccgcagagcttgatgggttaaaccaagagcgccgcgagctggaa
gttggtatgcagcaggaagccttaaaaagcctagagcatttaaagctcaacgaagctgaa
ttaccttggggtatcgccttatttcaagaagattggcatcaaggcgttatcgggattttg
gcctcgcgcattaaagacaaatatcatagacccgtgattgcctttgccgatgcgggcaat
ggtgaaattaaaggttcggcgcgttcgataaaaggcttgcatatgcgcgacttgctcgag
ttagtgaacactcgccatccaggattgattatcaaatttggcggtcatgctatggcggcg
ggtttatcgctcaaagcgggcagttttgcgacatttgctaaagcctatgatgatgcggtg
cgtgaacagcttaaacctgagttattaacgggcgagctttggtccgatggggaactcact
cctacagagttgaatcttgaaattgctcagctattgcgcaatgcggggccttggggacaa
gctttcgaagagccgctctttgatggttattttaaaatagtgcagcagcgccttgttggt
gagcgccaccttaagcttgtgctcgaaacccaatgcggcactgtgatgctcgatgccatt
gcctttaatgtggatttgcacacttggcccgatgcgacaattaatcatgctcgaattgtc
tataaactcgatgtgaatgagtatcgcggcaatttttcgctgcaactgatggttgaacaa
atcgaagctatgtaa

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