Shewanella sp. W3-18-1: Sputw3181_3365
Help
Entry
Sputw3181_3365 CDS
T00453
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00541
Biosynthesis of various nucleotide sugars
shw01100
Metabolic pathways
shw01250
Biosynthesis of nucleotide sugars
Module
shw_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Sputw3181_3365
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shw01005
]
Sputw3181_3365
Enzymes [BR:
shw01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Sputw3181_3365
Lipopolysaccharide biosynthesis proteins [BR:
shw01005
]
Lipid A
Sputw3181_3365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
ABM26178
UniProt:
A1RND3
LinkDB
All DBs
Position
complement(3843572..3844420)
Genome browser
AA seq
282 aa
AA seq
DB search
MSNKIINLGSIEIANDKPFVLFGGMNVLESRDLAMSIAETYAEVTQKLGIPYVFKASFDK
ANRSSVNSYRGPGMEEGLKIFEEIKKTFNLPLITDVHETYQCAPVAEVVDIIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDEIILCERGSCFGYNNLVVD
MLGMDEMKQSGYPVIFDATHALQRPGGRSDSAGGRRAQATELARSGMALGLAGLFIEAHP
DPDNAKCDGPCALPLHQLENYLKQMKAIDDLVKSFEPIDTSK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaaatcataaacctaggttcaatcgaaattgcaaacgataaaccttttgtg
ttgtttggtggcatgaacgtgcttgagtctcgtgatctcgcgatgtcgattgctgaaact
tatgccgaagtcacccaaaaattggggatcccctatgtatttaaggcctcctttgataag
gcgaatcgctcttctgtcaattcttaccgtggtccaggtatggaggaggggttaaagatt
tttgaagaaatcaaaaaaaccttcaatctgccattgatcaccgacgtacatgaaacctat
cagtgcgcacccgttgctgaagtggttgatattattcagttgccagcattccttgcccgt
caaaccgatttggttgtggcaatggcaaaaacgggtgccatcattaacgtgaaaaaaccg
cagtttttagcacctcacgagatgcgccatatcattactaaatttaatgaagcgggtaat
gacgaaatcatcctctgtgagcgtggctcatgttttggttacaacaacttagttgttgat
atgctgggtatggatgagatgaagcagtcgggttatccagtgattttcgatgcaacccat
gcactgcaacgccctggtggtcgtagtgactctgcgggtggccgccgtgcccaagcgact
gaattagctcgcagcggtatggcacttggtttggcaggtttgtttattgaagcccaccct
gatccagataatgctaagtgtgatggcccatgtgcgctacctttgcaccagttagaaaat
tatctgaagcaaatgaaagccattgatgatctcgttaaatccttcgagccaatcgataca
agtaagtaa
DBGET
integrated database retrieval system
