Shewanella sp. W3-18-1: Sputw3181_3414
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Entry
Sputw3181_3414 CDS
T00453
Name
(GenBank) TIM-barrel protein, yjbN family
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shw03016
]
Sputw3181_3414
Transfer RNA biogenesis [BR:
shw03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
Sputw3181_3414
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Gene cluster
GFIT
Motif
Pfam:
Dus
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
ABM26226
UniProt:
A0A6N3J8D0
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Position
complement(3893331..3894362)
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AA seq
343 aa
AA seq
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MSQHRIDVNTLKNNNIDTYSLDRTFSIAPMLDWTDRHYRYFARLMSAKALLYTEMVTTGA
ILHGRGDYLAYNQEEHPLALQLGGSNPQDLARCAKLAAERGYDEVNLNVGCPSDRVQNGR
FGACLMAEPELVAECVDAMKQVVDIPVTVKTRIGIDEQDSYEFLTYFIDIVNAKGCTDFT
IHARKAWLQGLSPKENREIPPLDYERVYQLKRDYPVLNISINGGVTTLEQAQGHLAQLDG
VMMGREAYQNPYILARVDQVLCGSQRAVISREDVIEAMLPYIEAHLQAGGRLNHITRHMI
GLFQGLPGARAWRRYLSENAHKNGAGIETVRQAFQSIQTEMTV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacacagaatagatgttaatactttgaaaaataacaatattgatacttactca
ctcgatagaaccttttccatagcgcccatgttggattggacggaccgacactatcgttat
tttgcacgtttaatgtcggctaaggcattgttatacacagaaatggtgactacaggggcg
atactgcatggtcgtggtgattacttggcctataaccaagaagagcatcctttggcactg
cagttaggtggttctaacccgcaggatttagcgcgttgtgctaaactcgcggcggagcgc
ggttatgatgaagtgaatctcaatgtcggttgtccttccgatcgtgtgcaaaatggtcgt
ttcggtgcttgtttaatggctgagcctgagctggtggctgagtgtgtggatgccatgaag
caagttgttgatattccagttacagtcaaaacccgcatcggtattgatgagcaagacagt
tatgaatttctcacgtactttatcgatattgtcaacgccaagggatgcacggattttact
attcatgctcgtaaggcttggttacaaggattgagtccaaaagaaaatcgcgagatccca
ccacttgattatgagcgagtatatcaacttaaacgtgattatcccgtgctgaatatcagt
attaatggtggcgttacaacgcttgagcaagcgcaagggcatttagcacaacttgatgga
gtgatgatggggcgtgaggcgtaccaaaatccttatatacttgcgcgggttgatcaagtg
ctttgcggtagtcaaagagcggtgattagccgtgaggatgtcattgaggctatgttgccc
tatattgaagcgcatttgcaggcgggtggacgcttaaatcatatcactcgccatatgatt
ggtttatttcaagggttaccaggtgctcgggcttggcgtcgttatttaagtgaaaacgcc
cataaaaatggtgcagggatcgagactgttaggcaggcctttcaaagtatccagacagaa
atgactgtgtga
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