Shewanella sp. W3-18-1: Sputw3181_3522
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Entry
Sputw3181_3522 CDS
T00453
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw02020
Two-component system
shw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sputw3181_3522
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sputw3181_3522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shw03000
]
Sputw3181_3522
Transcription factors [BR:
shw03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
Sputw3181_3522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RepL
HTH_24
HTH_28
HTH_23
MarR
MarR_2
Sigma70_r4
HTH_11
HTH_36
GntR
TrmB
HTH_7
HAV_VP
Motif
Other DBs
NCBI-ProteinID:
ABM26334
UniProt:
A0A6N3J8X7
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All DBs
Position
4019214..4019849
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AA seq
211 aa
AA seq
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MALIGKPKPDPTLEWFLSHCHIHKYPAKSTLIHAGEDSDTLYYIVKGSVAVLIKDEEGKE
MILSYLNQGDFIGELGLFEEQAERTAWVRAKQACEIAEISYKKFKQLIQVNPEILMKLSA
QMAYRLQSTSQKVGNLAFLDVAGRIAQTLLHLAKQPDAMTHPDGMQIKITRQEIGQIVGC
SRETVGRILKMLEEQNLIQAHGKTIVVYGTR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggctctgattggtaagccaaaaccggacccaactttggaatggtttttatcacactgt
cacattcataagtaccctgcaaagagcactcttatccatgctggtgaagattcagatacc
ctttattacatcgtaaaaggttctgttgccgtattgattaaagatgaagaaggtaaagag
atgatcctttcttatcttaatcaaggcgactttattggtgagttaggattatttgaagaa
caagcagaacgtaccgcttgggttcgagctaaacaagcatgtgaaattgcagaaatttca
tataaaaagtttaagcaactgatccaagttaaccctgaaattctgatgaaactgtctgct
caaatggcttatcgcctacaaagcacgagtcagaaagtcggcaatttagcgtttcttgat
gtcgcaggtcgtatagcacaaacattattgcacttagctaaacagcctgatgcaatgact
catcctgatgggatgcaaatcaagattactcgtcaagagattggccagattgtaggctgt
tcacgtgagactgtcggtcgaatcttgaaaatgcttgaagagcaaaatttaattcaagca
cacggcaaaacgatagtggtatacggtacccgttaa
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