Shewanella sp. W3-18-1: Sputw3181_3534
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Entry
Sputw3181_3534 CDS
T00453
Name
(GenBank) single-strand binding protein
KO
K03111
single-strand DNA-binding protein
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw03030
DNA replication
shw03430
Mismatch repair
shw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sputw3181_3534
03430 Mismatch repair
Sputw3181_3534
03440 Homologous recombination
Sputw3181_3534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shw03032
]
Sputw3181_3534
03400 DNA repair and recombination proteins [BR:
shw03400
]
Sputw3181_3534
03029 Mitochondrial biogenesis [BR:
shw03029
]
Sputw3181_3534
DNA replication proteins [BR:
shw03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sputw3181_3534
DNA repair and recombination proteins [BR:
shw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Sputw3181_3534
TLS (translesion DNA synthesis) factors
Other SOS response factors
Sputw3181_3534
Mitochondrial biogenesis [BR:
shw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
Sputw3181_3534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABM26346
UniProt:
A0A6N3J8M5
LinkDB
All DBs
Position
complement(4033123..4033833)
Genome browser
AA seq
236 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVLF
GKLAEITGEYLRKGSQVYLEGKLQTRKWKDQSGQDRYSTEVVIDQSGSMQMLGSRGQGGQ
AQGAPMGGGMPQNAGYQSAPQQAAPAQNQYAPAPQAAPAYQAPAQQQYAPPAPAQQQGYG
QPQAQQPQQGGYAPKPQAAPAPAYQAPAAPAQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgttaacaaggtaattttggttggcaatttgggacaagatccagaa
gtgcgttatatgccaaacggtaatgcagtcgcaaacattacagtagcgactagcgaatcg
tggaaagaccaacagggtcaacagcaagagcgcaccgaatggcaccgtgtggttctgttc
ggcaaattagctgaaattacaggtgaatatttacgtaaaggttcacaggtttatcttgaa
ggtaaactgcaaacccgtaagtggaaagaccaaagcggtcaagatcgctacagcactgaa
gtggttatcgatcaaagcggtagcatgcaaatgctaggtagccgtggtcaaggtggtcaa
gcacaaggtgcgccaatgggcggcggcatgccacaaaatgcaggctatcaatcagcgcct
cagcaagccgctcctgcacaaaatcagtatgcgccagcgcctcaagctgcacctgcttac
caagcccctgcgcagcaacaatatgctccgccagcacctgctcagcagcaaggttatggt
cagccacaggctcaacaaccacaacaaggtggttatgcgcctaagccacaagccgctcct
gcgccagcttatcaagcgccagcagcacctgcacagcgtcctgcaccacaaccacagcaa
aacttcactccagatttggatgatggctgggatgacgatattccgttctag
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integrated database retrieval system
