Shewanella sp. W3-18-1: Sputw3181_3594
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Entry
Sputw3181_3594 CDS
T00453
Name
(GenBank) RNAse G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
shw
Shewanella sp. W3-18-1
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shw03019
]
Sputw3181_3594
03009 Ribosome biogenesis [BR:
shw03009
]
Sputw3181_3594
Messenger RNA biogenesis [BR:
shw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sputw3181_3594
Ribosome biogenesis [BR:
shw03009
]
Prokaryotic type
rRNA processing factors
Sputw3181_3594
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF8260
Motif
Other DBs
NCBI-ProteinID:
ABM26403
LinkDB
All DBs
Position
complement(4111440..4112948)
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AA seq
502 aa
AA seq
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MNTSRLNQNKIQRKMGSELLINVTPSEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKI
SRVLPGMQAAFVDIGLDKAAFLHASDIVPHTECVADVEKGHFVVRDIAELVRQGQDIMVQ
VVKDPLGTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIELEEERSRLKKITLPYVDEDG
GFIIRTAAEGVGEDELAQDAAFLRRVWSKVSERRQRRGVALLYQDLALPVRIVRDFVGTE
LDRIQVDSRRTFDELQTFAQEFMPEIAEKIEHYSGPAPIFDLYDVENEIQRALGRKVELK
SGGYLIIDQTEAMTTVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIID
FIDMLNEEHKTRVLNSLNSALAKDRVKTNVSGFSGLGLVEMTRKRTRESLEHVVCSECPA
CHGTGSMKTVETVSYEIFREIIRLNRAYDADEFLLYCSPAVYQSLSGEESHLIAELEVYI
SKRIRLQNEPMYSQHKYDVVMM
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgaataccagtcgcttaaatcaaaataaaatacagcgcaagatgggttcagaattactg
atcaacgtaaccccatccgaggctcgcgtcgctttagttgaacacggtgtattgcaagaa
gtgcatattgaacgccgtatgaaacggggattagtcggcaatatttataaaggtaaaatc
agccgcgtgttacctggcatgcaagcggcttttgttgatataggtttagataaagctgca
tttcttcatgcttctgacatagtgccgcacactgagtgcgttgccgatgttgaaaaaggc
cacttcgttgtccgtgatatcgctgaattagtccgccaagggcaagatattatggtgcaa
gtagttaaagatcccttgggtactaagggagcgcgtttaacaactgatatcacgctgcct
tcccgttatttagtctttatgcctggctctagccatgttggggtttcccaacgtattgag
cttgaggaagagcgcagccgtttaaagaaaatcacacttccttatgtggatgaagatggc
ggatttattattcgcacggctgccgaaggcgttggagaagatgagcttgcccaagatgcg
gcgtttttacgccgagtttggtctaaggtcagcgagcgacgacaacgccgtggcgtggcg
cttttatatcaagatttagcgttgccagtgcgtattgtgcgtgattttgttggcactgaa
ctggatcgtattcaggtcgattcacgccgcacctttgatgagttgcaaaccttcgctcaa
gaatttatgcctgaaattgctgagaaaattgagcattattcaggcccggcacctattttt
gatctctacgatgttgaaaatgaaattcagcgcgcgctggggcgtaaagttgagttaaag
tcgggcggttatctgatcatcgatcaaaccgaagccatgacgaccgtcgacatcaacact
ggtgcctttgtgggtcatcgtaatctcgaagaaaccatctttaataccaatctcgaagcg
acccaagccattgcaaggcaactgcgcctacgcaatctaggtggcatcattattatcgac
tttatcgatatgcttaatgaagagcataaaacacgtgtacttaatagtttaaatagtgct
ttagccaaggaccgcgttaaaacgaatgtcagtggtttttctggtttagggctggtcgag
atgacgcgcaaacgcactcgcgagagtttagagcatgtggtttgtagcgagtgtccagct
tgtcatggcactgggagtatgaagacagttgaaactgtctcctatgaaatattccgagaa
attattcgattaaatcgtgcatacgatgccgatgagtttttgctgtattgttctcctgcg
gtatatcaaagtttgagtggcgaagaaagtcatctgatcgctgagcttgaagtttatatt
agtaaacgtattcgcctgcaaaatgagcctatgtactcacagcacaaatacgatgtggtg
atgatgtag
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