Shewanella sp. W3-18-1: Sputw3181_3774
Help
Entry
Sputw3181_3774 CDS
T00453
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00061
Fatty acid biosynthesis
shw00071
Fatty acid degradation
shw01100
Metabolic pathways
shw01212
Fatty acid metabolism
shw02024
Quorum sensing
shw04146
Peroxisome
Module
shw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sputw3181_3774
00071 Fatty acid degradation
Sputw3181_3774
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sputw3181_3774
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sputw3181_3774
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shw01004
]
Sputw3181_3774
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shw04147
]
Sputw3181_3774
Enzymes [BR:
shw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sputw3181_3774
Lipid biosynthesis proteins [BR:
shw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sputw3181_3774
Exosome [BR:
shw04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sputw3181_3774
Exosomal proteins of breast cancer cells
Sputw3181_3774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_1
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABM26579
UniProt:
A0A6N3J9V8
LinkDB
All DBs
Position
4320991..4322655
Genome browser
AA seq
554 aa
AA seq
DB search
MDTAIKTPIEMLAHWAKARGDEVYLRQPIKGQYLDFTWGEVQEKVQQLAGALRHLGFESG
DKIAVLSKNCAEWFITDLALMHGGYISVPIYPTANPDTIRYVLQHSGAKAIFVGKLDHWA
DQEAGVGGELLRLAMPYDTMPAQYQWEQLLNLGHPLIEAPLPKLDQVMTLIYTSGSTGQP
KGAIQTFASYGWTCKAVVRDLRTDGDDRLLSYLPLAHITERVAIEGSSFYSGSSVAFVES
LDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKIGLSKLNLLLKIPLLSSFVKYKIHKGL
GLNHCRLLGSGSAPIPPSLIHWYHNIGLNICEAWGMTENCAYSIINYPFDARKIGTVGRP
IQDCLIRQGDDGELLIKSPGLMTAYYLQPEATAAAFDADGFFHTGDLCAIDADGCVTITG
RVKDNFKTAKGKYVAPVPIERKLAQDPYVELICVIGSGLPHPVALVQLSEGASLQAREEV
RASLKATLDSVNPHLESHEHVDAIIVVSDPWTIENDVLTPTLKIKRHVLEKAFSERVDGI
RGAKICWEDEISIK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggatactgcgattaagacaccaatcgaaatgctggcacactgggctaaagctcgtggg
gatgaagtctatttgcgccaaccaatcaagggacaataccttgattttacatggggtgaa
gtgcaagagaaagtgcagcaattagcgggtgcgctacgtcacttaggatttgagtctggc
gataaaattgccgtcttatctaaaaactgtgcagagtggtttatcaccgatctcgccttg
atgcacggcggctatatcagcgtgccaatttacccgaccgccaaccctgataccatacgt
tatgtactacaacacagtggagctaaagccatttttgtcggtaagctcgatcattgggcc
gatcaagaagctggggttggcggagaattattacgcctagcaatgccctacgacactatg
cccgcccaatatcaatgggaacaattgctaaatctaggtcatcctttaattgaagctccc
ctacctaagctagatcaagtgatgacattgatctacacctcaggttcgacagggcagcct
aaaggtgccattcagacctttgctagctacggctggacctgtaaagccgttgtacgtgac
ttacgcaccgatggtgatgatagactcttatcctatctgccattagcccatatcactgaa
cgcgttgcgattgaaggctcatccttttattcgggtagctccgttgcctttgtcgaaagc
ctcgactcctttgtcgccgatgtgcaacgggctaaacctacagtctttttctccgtacct
cgtttatggagcttattccagaaaaatatcatcgataaaattggcctaagcaaactcaat
ctattacttaaaattccgctacttagcagttttgtaaaatacaaaattcacaagggatta
ggtttaaaccattgtcgcctgctcggctcaggatctgcgcctattccaccatcattgatc
cactggtatcacaatattggcctcaatatttgtgaggcttggggaatgacggaaaactgc
gcctattcgattatcaactatccctttgatgcccgtaaaattggtactgttggacgtcca
atacaggattgcttaatacgccaaggggacgatggcgagttactgatcaaaagccccggt
ttaatgaccgcctattatttacaacccgaagcgactgcggcagccttcgatgccgatggt
tttttccatactggcgatttatgtgccatcgatgccgatggctgcgtgactattactggt
cgtgttaaagacaattttaaaaccgccaaaggtaaatatgtcgcgccagttcctattgaa
cgtaaattagctcaggatccctatgtagaactgatttgcgttattggctctggtttgcca
catcctgtcgcactggtacaactatcagaaggggcaagcctacaagcccgtgaagaagtg
agagcctcactgaaagcaacactcgacagtgttaacccacacttagagtcccatgaacat
gtcgatgcaattatcgtggtcagtgatccttggacaattgagaatgatgtactcacccct
accctcaaaatcaaacgtcatgtgcttgaaaaagcctttagcgaacgagtcgatggcatt
agaggcgctaaaatatgttgggaagatgagatttctattaaataa
DBGET
integrated database retrieval system
