Shewanella sp. W3-18-1: Sputw3181_3821
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Entry
Sputw3181_3821 CDS
T00453
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00330
Arginine and proline metabolism
shw00480
Glutathione metabolism
shw01100
Metabolic pathways
shw01110
Biosynthesis of secondary metabolites
shw04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Sputw3181_3821
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Sputw3181_3821
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Sputw3181_3821
Enzymes [BR:
shw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Sputw3181_3821
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ABM26626
UniProt:
A0A6N3J9A0
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Position
4375649..4377811
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AA seq
720 aa
AA seq
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MKSLKVAASLSVRSCFDIDREVVNVLTTDFCDVGAAVVSVDDVRNGIVEKIKNTGLKLPI
FVSVCCEETFPDDVCSSITGVFELCGDNTDFYGKQVETAVNKYEQALLPPFFGTLKKYVE
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETIFRADMCNADVKLGDLLIHEGAPLDAQ
KYAAKVFNADKTYFVLNGTSSSNKVATNALLAKGDLVLFDRNNHKSNHHGALIQAGATPI
YLETARNPFGFIGGIDAHCFQESYLREQIREVAPERADEKRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMNDCSPLLLELTPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQARYCNHKRFNNAFMMHASTSPFYPLFAALDVNAKMHEGASGRYL
WREAVKAGIEARKLLLKKCKYIKPFVPTMIDGRLWQEYETEQMADDLRFFEFEPGQKWHS
FDGYEKGQYFVDPCKFLLTTPGIDAETGKYTEFGIPATILANFLRENNIIPEKCDLNSIL
FLMTPAEDMAKMQHLVSQISRFEKLVDEDAPLSEVLPNVYNANKARYKDYTIRQLCQEMH
NLYVSHDVKQLQKEMFRKAHFPTKVMDPQEANLEFIRGKVELVPLSQIEGRIAAEGALPY
PPGVLCMVPGEIWGGAVQRYFLALEEGINLLPGFSPELQGVYLENTAEGKIQALGYVLAK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattaaaagtagccgctagcttatctgtcagatcttgtttcgatatagacaga
gaagtcgtcaacgtattaaccactgatttttgcgatgtaggtgcggctgttgtctctgtt
gatgatgttagaaatggtattgttgaaaagattaaaaataccggattaaaactaccgatt
ttcgtttcagtttgctgtgaagaaaccttcccagatgatgtatgctcatcaattactggg
gtatttgaactctgcggagataacactgacttctacggaaaacaggtggaaactgcggtt
aataaatatgagcaagctttattaccccctttctttgggacactcaaaaaatacgtcgaa
atgggcaactccacctttgcttgccctggccatcaaggtggacaattcttccgtaaacac
cctgtaggccgtcagttcttcgacttttttggcgaaactattttccgtgctgatatgtgt
aatgccgacgttaaattaggcgacctactcatccatgaaggtgcgccgctggatgcacaa
aaatatgcggctaaagtgtttaatgccgataaaacttatttcgtactcaatgggacttct
tcttccaataaagtggccactaatgcgttattagcaaaaggggatttagtactctttgat
cgcaataaccataaatcgaaccaccatggcgcgctaattcaagcgggtgcaacaccgatt
tatttagaaacagcacgtaaccccttcggttttattggtggtatagatgcccactgtttc
caagaatcttatttaagagaacaaattcgtgaagttgccccagaacgcgccgatgaaaaa
cgcccattccggttagcgattatccaactgggtacctacgacggtactatctataatgct
cgccaagtggttgatcgtattggtcatctatgtgattacattctgtttgattcagcttgg
gtgggctatgaacagtttattcccatgatgaatgactgttcaccactactgctcgaactg
acgccagaagatcctggtattatcgtgacgcagtctgtacacaaacaacaagcaggcttc
tcacagacctcacaaatccataaaaaagataagcatatcaaaggccaagcgcgatactgt
aaccataagcgtttcaataacgcctttatgatgcatgcctcaaccagccccttctatcct
ctgtttgcggcgctggatgtgaacgcaaaaatgcatgaaggagcaagcggtcgttatctg
tggcgcgaagcggtaaaagcgggtatcgaagcacgtaagctattgcttaaaaagtgtaaa
tatatcaaaccattcgtgccaaccatgatcgacggtcgcctatggcaagaatatgaaacc
gagcaaatggccgacgatttacgcttctttgaattcgaacccggtcaaaaatggcactcc
ttcgacggttatgaaaaaggccaatatttcgttgatccttgtaaattcctgttaacaact
ccgggtattgatgccgaaacgggtaaatatactgagtttggaattcccgcgactattttg
gctaactttttacgggaaaataatattattccagagaagtgcgacttaaattcgatttta
ttcctgatgacacccgcagaagatatggcaaaaatgcaacatttagtgtcgcaaatatcc
cgcttcgaaaaattagttgatgaagatgcaccattatccgaagtcttacctaatgtttat
aacgccaataaagcccgttacaaagattatactatccgccaactctgccaagaaatgcat
aatctttatgtcagccatgatgtaaaacaattgcaaaaagaaatgttcagaaaagcacat
ttcccaactaaggtaatggaccctcaagaagctaatcttgaatttattcgcggtaaagta
gaactagtcccactctctcaaattgaaggtcgtatcgctgccgaaggtgcgctgccatat
ccaccaggagtgctatgtatggttccaggtgaaatatggggaggtgctgtacagcgttat
ttcttagcccttgaagaaggtatcaacttattacccggattctcgccagagttgcaaggt
gtttatctcgaaaacaccgccgaaggcaaaatccaagcattaggttatgtattagctaaa
taa
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