Shewanella sp. W3-18-1: Sputw3181_3871
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Entry
Sputw3181_3871 CDS
T00453
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
shw
Shewanella sp. W3-18-1
Pathway
shw00630
Glyoxylate and dicarboxylate metabolism
shw00680
Methane metabolism
shw01100
Metabolic pathways
shw01120
Microbial metabolism in diverse environments
shw01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
shw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sputw3181_3871
09102 Energy metabolism
00680 Methane metabolism
Sputw3181_3871
Enzymes [BR:
shw01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Sputw3181_3871
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ABM26675
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Position
4436109..4438958
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AA seq
949 aa
AA seq
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MRLTRKTDQVVEPKASTLGLNRRQFLKSAGLATGGIAAASMLGTGMMRKAEAKDIPHNVP
TEVKRTICSHCAVGCGIYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGEKRLK
YPMKLEGGKWKKISWDQAINEVGDKMASIRQESGPDSIYFMGSAKFSNEQAYLYRKFAAL
WGTNNVDHSARICHSTTVAGVANTWGYGAQTNSINDIRNSKCIMFIGANPSEAHPVAMQH
ILIGKERGAKIIVVDPRFTRTAAKSDEYVHIRPGTDIPFIYGLLWHIFENGWEDKEFIKH
RVYGMDRIREEVKKYTPEEVENVVGVPKAQMYRVAKMMAETKPGTIVWCMGGTQHHVGNS
NTRSYCMLQLALGNMGVPGGGTNIFRGHDNVQGATDFGLLFDNLPGYYGLTTAAWDHWAN
VWDLDPKWVSSRFDQGEYLGQTPQTSTGIPCSRWHDGVLEDKTKIAQKDNIRLAFFWGQS
VNTETRGREVREALNKMDTVVVVDPFPTMAGVMHQRQDGVYLLPAATQFETYGSISATNR
SVQWRSKVIEPLFESLPDHVIMCKLAKKVGIDKELFKQIKVNGDEPLIEDITREFNKGMW
TIGYTGQSPERLKMHQENWGTFDADSLEAPGGPAKGETYGLPWPCWGTPEMKHPGTQILY
NEAKHVKDGGGNFRARYGVEHEGNNILAEGTYSKGSEIQDGYPEFTADMLKQLGWWDDLT
ADEKKHAEGKNWKTDISGGIQRVAIKHGCIPYGNAKARCIVWTFPDDIPRHREPLYTPRR
DLVAKYPTYEDRMVARLPTLYKSIQDKDFAKDFPLALTSGRLVEYEGGGEESRSNPWLAE
LQQEMFIEMNPADAADRGIRDGDNVFVHGPEGAKITVKAMVTPRVIAGECFMPYHFAGVF
EGESLAKNYPEGTVPYVIGESANTILTYGYDVVTQMQETKSSLCQISKA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacccgcaaaacagatcaggttgtcgagcctaaagcatcgaccctgggtctc
aatcgtcgccaattcttaaaatcggcaggtcttgccactggtggtatcgccgcagcttca
atgctgggtacaggcatgatgcgtaaagcagaagccaaagatatccctcacaacgttcca
accgaagttaaacgtaccatttgttctcactgtgctgtgggctgtggtatctatgctgaa
gtacaaaacggtgtgtggacaggtcaagaacccgcattcgatcatccattcaacgccggc
ggccactgtgctaaaggtgcagcactgcgtgagcatggtcatggtgaaaaacgcctgaaa
tacccaatgaagttagaaggcggaaaatggaaaaagatctcttgggatcaagccattaat
gaagtaggcgataaaatggcctctattcgtcaagaatctggcccagactctatctacttc
atgggtagtgccaagttctcaaacgaacaagcttatttatatcgcaaatttgcggcactg
tggggaacgaacaacgtcgaccattcagcccgtatttgtcactctaccacagtagctggt
gttgctaacacttggggctacggtgcgcaaaccaactcaatcaacgatattcgtaactct
aagtgcattatgtttattggggcaaaccccagtgaagcacacccagttgccatgcagcat
attttgattggtaaagaacgcggtgccaaaatcatcgtagttgatccacgtttcacccgt
actgcagcgaaatctgacgagtacgtgcatatccgtcctggtacagatattcccttcatt
tatggtctgttatggcacatattcgaaaacggctgggaagataaagagtttatcaagcac
cgcgtttacggtatggatcgcatccgcgaagaagtgaaaaagtacaccccagaagaagtt
gaaaatgtggtgggcgtacctaaagcccaaatgtatcgtgttgccaagatgatggctgaa
actaaacctggcaccattgtttggtgtatgggtggtacgcaacatcacgtcggtaactcg
aacacccgttcatactgcatgttacaactcgctttaggtaacatgggtgttcctggtggc
ggtactaacattttccgtggccacgataacgtacaaggtgcaaccgactttggtttgtta
tttgataacttacccggttattacggtttaactaccgccgcatgggatcactgggccaat
gtatgggatctcgatcctaaatgggtctcaagccgtttcgaccaaggtgaatacttaggt
caaacaccacaaacttcaacaggtatcccatgctctcgttggcacgatggcgtgttagaa
gataaaaccaagatagcgcagaaagacaatattcgtctggcgttcttctggggacaatct
gtcaacactgaaacccgtggccgcgaagtgcgtgaagcactgaacaaaatggataccgtc
gttgttgtcgatccattcccaacgatggcaggtgtaatgcaccaacgtcaagatggtgtt
tatctgctgccagctgcaacccagtttgaaacctatggttctatctctgcaaccaaccgc
tcagttcagtggcgctctaaggtaatagagccgctgttcgaatcactgccagatcatgtg
atcatgtgcaaactcgctaagaaagtgggtattgataaagagttgttcaaacaaatcaaa
gtcaatggtgatgagcctttgattgaagatattacccgtgaatttaacaaaggtatgtgg
actatcggttacaccggacaaagcccagaacgtttaaaaatgcaccaagaaaactggggc
acttttgatgctgacagcttagaagctccaggcggtccagccaaaggtgagacctatggt
ttaccttggccttgttggggtacaccagagatgaaacatcctggaacccaaattctgtat
aacgaagccaagcatgttaaagacggcggcggtaacttccgcgctcgttatggtgttgag
catgaaggcaataatattcttgctgaagggacttactctaaaggcagtgagatccaagat
ggctatcctgaatttaccgccgatatgctcaagcaattaggctggtgggatgacctaaca
gcagacgagaaaaaacacgccgaaggcaaaaactggaaaacggatatttctggcggtatc
caacgtgttgctatcaaacacggctgtatcccttacggtaacgctaaagctcgttgtatt
gtctggacattccctgacgatattccacgccaccgcgaaccactttacacgcctcgtcgt
gacttagttgctaaatacccaacctacgaagaccgtatggttgcgcgtctaccgacgctg
tataagtcaattcaagacaaggattttgctaaagacttcccactggcactcacatcaggc
cgtctagtggaatacgaaggtggtggtgaagaatcccgttctaacccttggttagctgaa
ctacaacaagaaatgttcatcgaaatgaaccctgctgatgcagcggatcgcggtattcgt
gacggtgataatgtttttgttcatggtccagaaggcgccaaaatcacggttaaggcaatg
gtaacaccacgcgtaattgctggtgaatgttttatgccataccactttgcaggggtgttt
gaaggtgaaagtctcgcgaaaaactatccagaaggcacagtgccttatgtgataggcgaa
tccgcaaacaccattttaacttatggctacgatgttgtgactcagatgcaagaaactaaa
tccagcctctgccaaattagcaaagcctaa
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