Schistosoma haematobium (urinary blood fluke): MS3_00000413
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Entry
MS3_00000413 CDS
T05004
Name
(RefSeq) hypothetical protein
KO
K09291
nucleoprotein TPR
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MS3_00000413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00000413
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MS3_00000413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
75576353
NCBI-ProteinID:
XP_051073730
UniProt:
A0A922LV78
LinkDB
All DBs
Position
1:complement(31991552..32026439)
Genome browser
AA seq
2493 aa
AA seq
DB search
MMEFESLCNYGGVTEEEIGLVSPELVTKLNIAFDNIYHDAEVAKEELAKIQKAQENSALH
YSEEQYKLKSASEELEKKLRECNDALYAIEEKLHNVNVEKEDFRTKLNDCLSVNNELNLA
IRGLENEKEILSDQLKNKLGLIDSLTSEISELRTEAENVRKLKIEMMLKSEDIIGRESSI
KAQEARWSDELSNLQRHNDWLEERLQQTTDQLLTVRRDSYQKSYSLEAELVLRNVELENS
KQCVERLETNVQKLTQTNDEYIVKLKLVTDEQIKMEQLYGNEIEAQKQLIKLYKEQVKEL
EEKNEELSNAASSIQGLLKEAYENVSRLENENSSLQAKCSEANSKLQIATENLASEMERS
QHLLDKFRVDGLSEEELRQLNPSVAATLSALKRGHSLTQLYTDYVQVVEDRDQLKLDKQR
LTEYVEQMVDELKEKAPLLRNQQEEYRKLQTELKELTSCYQCTAKKLEEAQLQKRESERR
AGFYRRETSRLKQTCSDLSKQVKSLLYEVEVSRGTVIRNEGDFCAKSDIRDLNEPEDHPV
PDSSVDITNVSSVLENLASSAMIIDDHLVTWKNLDELQSQNQRLLCVARDLAAQLEKHEQ
EDSDTIKRMSELSSRVETLSGELDVVRLAAREARTEANMFSQQRDQYRALLKKYDIDLSD
KEELSSAQSQESILDDVNPLSRCMINNKTPSKGSPPSNGSSAVIERLEGALSSLQAEFAR
YREDKLESDHVYTTTVDSLRREYNEARLLNQKLSSQLDFTHEKLRASEANVAGYKQEITI
LREMNARYSTSAASSEAELSRLRDELTHASDRLTTAEVDARHFSRQLEAVRANETRLKQE
IDSLRRHDQIHSQLMHQLQSIQGSLEQRESMDRSLNERKIEQLEKQLSTVNSALIDASKA
SQIAQQTLQHELALSRESVESSGREIQQLNTRIRDLEERLAAVRSHDDNMEPSISESSPE
CSKKAQIRVRELEHEIESLKSSLESSRQQSDRMKTLAEQAEERLNEIVEENKRLEEHFSR
DMCETKQRCEFLEAQLDLERKERQNLVNENIRTTEEAHKLNADLRRELASLQNELESSRT
RYESALQVEAGAKAEIECHQQAAQEARDKYERELTLHAHDVELLTTVRSQLDSIKMHSGE
LEQELNESRSKAETAITDLKIQMELWESEKQELNRQLKQSQEDQNLLQDQIIQLTQQMVS
LRKSLDKSNISAEDSMSSTQDIESINSDIKTSEELLQVIGYLRRQKNLADVAHEAASAEV
SRLLLRVSSLESQKENLQSQIDNERKAAELAMETARKHSEVMERVEQLNLVTESNRLLRH
EREVLRSKLSDAENQLAKLNDEVGPLKQSNSDLIAQKDILMSDKRSLEEERDRWKERCSR
LVETAQRMDPEQYRLACNERDELQRRLNRAEEEVQNNANKLYDLKNESDDQIKKLNDLLE
SARNSYQEAEQKISSFSVQENLLREDLSAKETTIMKLREIGRKYRQETEVLRRKLNDSRS
DEAQLQTTNEALTEAKADLVTLRSDYSSLRTEYDLLEASVTEALQFLDEVKARESVITIM
NSSVGESDIEINPNMSNGQKVVSEFRRLLSGLCNEIDRLQQHSDSQKERLLRTQLIESQL
TKSQKDCTELRARLIELQSNSVHPQTVSVCLQTSGASSPAASTLQESESQDGVQITHTFV
PRALALGASPTNQATGNQLHFETPTSLNITDGSSTETTSSVVSQSIPAWIMRAGATVQPV
HPTPAITPPNSLAGPKQTAEIRPITSNVAAVMPTPAPSSVPMLITSGQSENVPICGPSSI
AICSPVSDTTVGPSSSLFTSCDQNAASLLRNTFLRRGNILNQPQSNILTPACSSSVPTSA
PRSTTVSITGKRRFEESCSSSTVDSILHIIPPVDDNMVSTSEVSRNNENSFLSAINTNHF
HQQQFNPGSIPSESKRIRQAVVSGPSTSISFTQASPSPIVLGRSPFGISAPATTPLHATA
SRLVAGQQEPSSSTLGTLTVATGVAGIITPGTFETSESVERSSNEAGVEIEQATADIVIR
QELGENVRGGIDVPTMDGHTENIEVVESEVRTSDQNLTSPIKPTSSTLEEVCESSDEEQE
CYSENDAFYDADQRESGSMDDEYVESDSKDSSFDVNNNNNIRFNAVPTTSRPSGFATEDL
CKQEVDTVYNESSVPEEGEAEDYMEEGDYDEYEREDEANCDSYTEDEEEEEEGEQEVIEL
SSGSDDDTQARGADAEEHHSSGVDNYGNEETNEHTAPTDVEVPENVGDCNERVGEDDGQL
HYETKSMEKSDSTPQISEKVPTSLNAEMEPISSSKGLFGESSIPNLFSNSGLPKCSGSLL
GSSGLFSGFKPSSLTVPYSVATTESGLPSGSCTGLFKSFLPVNTVSSSTATPLLFKPSTF
SASVAASKEPSSSGDSSTARPKIQPIVWDSFDPSTAQSSVSDSACTSGPARKKKWCPVTS
VPRATRRPSLPTSRGCAAGKPGSIRGGLPPRRG
NT seq
7482 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtttgaaagtctgtgtaattatggtggggttactgaggaagaaataggatta
gtcagccctgaactagttactaaacttaatattgcatttgataacatctatcacgatgct
gaagtggcgaaagaggaacttgcgaaaattcagaaagctcaagaaaatagtgccttgcat
tattctgaagagcagtacaaactaaagtcagcatctgaagagttagagaagaagctgaga
gaatgcaacgatgcactttacgctatcgaagaaaagcttcataatgttaatgtggagaag
gaggatttccgtacaaaattaaacgactgtttgtccgttaataatgagcttaacctcgct
atccgtggattagaaaatgagaaagaaattttgtcagatcaactaaagaataagctcggg
ttgattgactctctaacctctgaaattagcgagctacgtacagaagccgaaaatgttcgg
aaactaaaaatagaaatgatgttgaagtcggaagatattatcgggcgtgagtcgtcgata
aaagctcaagaagctcgttggtcagacgaactatctaacttacagcgacacaatgactgg
ctagaggaacgtctccaacagacaactgaccagttactgacagttaggagagattcgtac
caaaagtcttactctcttgaagctgaacttgttcttcgtaacgttgaacttgagaactcc
aaacagtgcgttgaaagactagaaacaaatgtacagaagcttactcagacaaatgacgag
tacatcgtcaaacttaaactagttacggatgaacaaataaaaatggagcagttgtacgga
aatgaaattgaggcacagaagcaacttataaaactgtacaaggaacaagtaaaagagcta
gaagaaaagaatgaggagcttagtaatgctgcttcatccatccagggcctcttaaaggaa
gcttatgagaatgtgtcaaggttggagaatgaaaactcctctttacaagcgaagtgcagc
gaagcaaattccaaactacagatagctactgaaaatcttgcttctgagatggaaagaagt
caacatcttctggataagttcagagtggatggtctatctgaggaagagttacgccagctt
aacccatctgtggccgctacgctgagcgctttaaagcgtggccatagtttaacacagttg
tatacagattatgtgcaagttgttgaagatcgagaccaactcaaacttgataaacaacga
ttgacggagtatgtggaacagatggtcgatgagctcaaagaaaaagctcctctcctacga
aaccaacaagaggagtatcggaaattacaaacggagttgaaagagcttacgtcttgttat
caatgtacagcgaagaagttagaagaagcgcagttgcaaaagcgagagagtgagcgacgt
gctggattttaccgtcgagagaccagtagacttaaacaaacgtgctccgatctatccaaa
caagtgaagtctctgctgtatgaagttgaagtatctagggggactgttattcgtaatgag
ggagatttttgtgccaagtcagacataagggatttaaacgaacctgaagatcatccggtt
ccagatagctcagtggatataaccaatgtttcaagcgtgttggaaaatctggcctcctct
gcaatgattattgatgatcatcttgtcacatggaaaaacttggatgagctacagtctcaa
aatcaacggctgctctgcgttgctcgtgatcttgctgcccagctagaaaaacacgagcaa
gaagattcggacacaattaagcgtatgtctgagctgtcttctcgtgttgaaactttatct
ggtgaattggacgttgtacgtttagccgctcgtgaagcacgaacagaagcaaatatgttt
tctcagcaacgtgaccaatatcgtgctttattgaaaaaatatgacatcgacttatctgat
aaagaagaacttagttctgctcaaagtcaagagtctattttagatgatgttaatccgcta
agtcgctgtatgatcaataataaaactccaagtaagggttctcctcccagcaatggatcc
tctgctgttattgagcgtctggaaggtgccctaagctcgttacaggcggaattcgcacgt
tatcgggaggacaagttggagtcagatcatgtatatactactacagtcgatagtctacga
agagaatacaacgaagctcgactgttaaatcagaaacttagctcacaacttgattttact
cacgaaaagctgcgtgcatcagaagctaatgttgctggatataaacaagaaatcactatc
cttcgtgaaatgaatgcccgctactcaacttctgcagcctccagtgaagcagaattatca
agacttagagatgaattaacccatgcatctgatcgcctcacaacagcagaagtggatgca
agacatttttcgcgacagttggaagcggtgcgagctaatgagactcgtcttaaacaagaa
atagattcattacgccgccatgatcaaatccattctcagctaatgcatcaacttcagtct
atacagggaagtctcgaacaaagagagtcaatggatcgttcattgaatgaacgaaaaatt
gaacagttggagaagcaactatctactgtcaattcagctcttatagatgcttccaaggcc
tcccaaatagctcaacaaactttgcaacacgagctagccctttctcgtgagtccgtagag
tctagtggcagagaaattcaacaattaaatacccggatacgagatttagaggaaagattg
gcagctgttagatctcatgatgacaatatggaaccaagtatatctgaatcatctcctgag
tgttcgaaaaaggctcaaattcgtgttcgtgaactggaacatgaaattgaaagtcttaaa
tccagtttagaatcatctcggcagcaatctgatcgcatgaaaacgttggctgaacaagct
gaagagcgtctcaatgaaattgtagaagagaataaacgactggaagagcacttttcacgt
gatatgtgtgagactaaacagcgttgtgagtttttagaggcacaactagatctagaaaga
aaagaacgtcaaaatcttgtaaatgaaaatatacgaactactgaagaagcccataagttg
aatgcagatttacgtcgagaattggctagcttacagaatgaattagaaagctccaggact
cgttatgaatcagctctccaagtggaagctggtgctaaagccgaaatagaatgtcatcaa
caggctgcacaagaggctcgtgataaatatgaacgtgaactgacattacatgcacacgat
gtggagttattaacaacagtacgttcacaattggattctattaaaatgcattccggtgaa
ttagaacaagaattaaatgaatctagatcgaaagcagaaactgcaattactgatttaaaa
attcaaatggagttatgggaatcggaaaagcaggagttgaacaggcaattgaaacaaagt
caagaagaccagaatttgttacaagatcaaataattcaacttacacaacaaatggtttca
ttaagaaaatctttagataaatcaaatatttctgctgaagacagcatgagttccactcaa
gatatcgagtcaattaattcagatataaaaacctctgaggaattattacaagttattggt
tacctcaggcgtcagaaaaacttggcagatgttgctcatgaagctgctagtgctgaagta
tcccggttgttattgagagtgtctagtttggaatcacaaaaggaaaatttacaatctcaa
atcgataatgaacgtaaagctgctgaattagctatggaaactgctcgtaaacactctgaa
gttatggaacgtgttgaacaattaaatttggttactgaatctaatcgattactgcgtcat
gaaagagaggttttgcgatcaaagttatctgatgcagaaaatcagcttgcaaaattgaac
gatgaagttggtccattaaaacagtccaacagtgatttgattgctcagaaagatattcta
atgtctgataaacgatctcttgaagaagaacgtgatcgttggaaggagcgttgtagtcga
ttagtagaaacagctcaacgcatggatcctgaacagtatagacttgcatgtaatgaacgt
gacgaattacaacgtagattaaatcgagctgaggaggaagttcaaaataatgctaataag
ttatatgatttaaaaaatgaatcagatgaccagataaaaaagctaaatgatcttttggaa
agtgcgcgtaattcataccaggaagctgaacagaaaatttcttcattcagtgttcaagaa
aatttattaagagaagatttaagtgcaaaagagacaacaattatgaaacttcgtgaaatc
ggacgaaaatatcgtcaggaaaccgaggtattacgacgaaaactcaatgatagcagatca
gatgaagctcaacttcaaactacgaatgaagcattaactgaagctaaagcggatttggtt
actttacgttctgactattcttctttacgtactgaatatgatctcttggaagcaagtgta
acagaagctcttcagtttttagatgaagtgaaggctagagaatcagttataacaattatg
aattcatctgttggagaatcagatattgaaataaatcctaatatgtctaatggtcaaaaa
gtggtgagtgaatttcgtcgtcttctgtcaggtttatgtaatgagatcgatcgtttacaa
caacattcggattctcaaaaagaacgtttactacgaactcaacttatagaatctcaattg
acaaaatctcaaaaagattgcacagaacttcgggctcgtttaattgagcttcaatcaaat
agcgtacatcctcaaactgtgtcagtatgtttgcagaccagtggagcctcatctcctgca
gcatcgaccttgcaggaatccgagtcccaagatggtgttcagataacgcatacatttgta
ccacgggctttggctttaggtgcttccccaacaaatcaagccacagggaatcagttacat
ttcgaaactcccacttctttgaacattactgatggtagtagtacggaaactacaagttct
gtcgtatctcaatcaattcctgcttggattatgcgtgctggagccactgtacaaccggtc
catccaacacctgctattactccacctaattcacttgctggtcctaaacagacagcagaa
ataagacctatcacaagtaatgtagctgctgtcatgccaaccccagcaccatcatcagtc
ccgatgctgataacaagtggtcagtcagaaaatgtccccatttgtggaccctcaagtatt
gcaatttgttcacctgtatctgatacaactgtaggtcccagctcatcattgtttacgtct
tgcgatcagaatgctgcgtctttattgcgaaatacatttctacgccgaggtaatatcctt
aaccagcctcaaagtaacattttaactccggcttgttcttccagcgttccaacttcagca
cctcgttcgactacagttagcataactggaaaacgtcgattcgaagaaagttgttcaagc
agtactgtggactcaatacttcatattataccaccagtagatgataacatggtttcaaca
agtgaagtttctagaaataatgaaaactcgtttttgtctgccattaacactaaccatttc
catcagcaacaatttaaccctggctctattccttctgaatctaagcgtatacgccaggca
gtggtcagtggtcccagcacatcaatatcttttacccaggcaagtcctagtccaattgtc
cttggtagatcaccatttggtatcagtgcacctgctacaactccgttacatgcaactgct
tctcgtttagttgctggacaacaagaacccagtagctctacattaggtacactgacagtc
gctaccggtgtagctggtatcataactcctggaacatttgaaacctcagaaagtgtggaa
cgatcatcaaatgaagccggtgtagaaatagaacaagctacagctgatattgttattaga
caagagcttggtgaaaatgtaagaggtgggattgatgtacctacgatggatggtcacact
gaaaatattgaagttgttgagtctgaagtccgaacatctgatcaaaatttaactagtcct
ataaaacctacatcaagtacactagaagaggtatgcgagtcttctgatgaagagcaagaa
tgttattcggaaaatgatgctttttacgatgctgatcaacgtgaatctggatccatggat
gatgaatatgtcgaaagtgattcaaaggattcctcatttgatgttaataacaataataac
attagattcaatgctgttcctacaacttcaaggccgtcaggattcgctacagaagatctt
tgtaaacaggaagttgatactgtttacaatgaaagttctgtacctgaagaaggagaagca
gaagactacatggaagaaggggattatgatgagtatgaaagagaagatgaagctaattgt
gattcatatacagaagatgaagaagaggaggaagaaggagaacaagaagtaatcgaattg
agtagtggttctgatgatgatacccaggcacgtggtgctgatgctgaggagcaccactct
tctggtgtggacaattacggcaacgaggaaacaaatgaacacacagcacctacagatgtg
gaagtacctgaaaatgtcggtgattgcaatgaaagggtaggtgaggatgatggacaatta
cattatgagacaaagagtatggagaaaagtgactccactcctcagatttcagaaaaagta
ccaacttctctcaatgcggagatggaacctatttcttctagcaagggtttatttggcgaa
tcatctattcctaatctctttagcaactctggtctgcccaaatgttccggctcattattg
ggttcatctggtcttttctccggtttcaagccttcttcactaactgttccatattcagtt
gctactactgagtccggacttccgtctggtagttgcacgggacttttcaaatcatttttg
ccagtgaatacagtctcaagttcaaccgccactccattactttttaagccttctacattc
tctgcttcagttgcagcttccaaagaaccttcaagctctggggattctagcacagctcga
ccaaagattcaacccattgtctgggattccttcgacccttctactgcacagtcaagtgta
tcagatagtgcatgtactagtgggccggctcgaaaaaaaaaatggtgtcctgtcacttcc
gtgccaagagctactagacgtcccagcctacctactagtagaggttgtgctgctggaaag
cctggatccattcgtggtggtttacctcctagaagaggttaa
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integrated database retrieval system
