Schistosoma haematobium (urinary blood fluke): MS3_00001520
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Entry
MS3_00001520 CDS
T05004
Symbol
DHX16
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00001520 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shx03041
]
MS3_00001520 (DHX16)
Enzymes [BR:
shx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MS3_00001520 (DHX16)
Spliceosome [BR:
shx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
MS3_00001520 (DHX16)
Complex C
U4/U6.U5 tri-SnRNP related factors
MS3_00001520 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_19
nSTAND3
AAA_22
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
24588148
NCBI-ProteinID:
XP_051074408
UniProt:
A0A922S6L4
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All DBs
Position
1:complement(50771302..50792919)
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AA seq
915 aa
AA seq
DB search
MSSPKRRCFRQRNASESSTEDEIVEGEKSGESSGLEEYEKEELTRQNDLKERDAFVKRLV
DRDQQQTKGVSSRSASKHEEALRKITSGEVSREEMIAELRKASRRTYLRKRQSDKLADLQ
AEIQDEELFFENEELTEKEKAELLYKKTILAVAKSHQQAGELENIFRYYIPTEEKRPEDH
ELKGSESKLNDEGKRWEQEHLSSALYSFGAKDKVEQEVKYDLVLDDEIEFLKTLTRPGAN
IEQEVSLDEEQKRKATDKREALKEAKRSLPIYKFRDALLQAIADHQVLIIEGETGSGKTT
QIPQYLYEAGYCNGGKRIGCTQPRRVAAMSVAARVSQEMSVRLGSEVGYSIRFEDCTSEH
TIIKYMTDGMLLREFLTEPDLGSYSVMIIDEAHERTLHTDILFGLVKDVARFRSDLKLLI
SSATLDAEKFATFFDDAPVFRIPGRRYPVDIYYTKAPEADYIEAAIISILQIHVTQPPGD
ILVFLTGQEEIETANELLMERTRKLGSKIRELIILPIYSSLPSDMQAKIFAPTPPGARKV
VLATNIAETSLTIDGIIYVIDTGFCKQKFYSARSGVESLIVVPISQAAADQRAGRAGRVA
AGKCFRLYTSHAYHTELDPQPIPEIQRTNLGNVVLLLKSLGIDDLLHFDYMDPPPHDALI
MALEQLYALGALNHKGELTKMGRQMAEFPCNPQLSKMILASDKYKCSGDIITIASMLSVN
NAIFYRPKDKLIHADTARKSFSHIAGDHIMLLNVYNQWAESDFSSHWCYEQFIQYRTMKR
ARDIRDQFVGLLDRVEIDLVNNPHDHVNIRKAITAGFFYHTARFTGDGYKTVKQKHTIYP
HPNSCLSEALPKWVIYHELVYTTKEFMRQIIEIESKWLLEVAPHYYKEKEIEYTTEKVSR
NKGKSRAELEPSEGV
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaccaaagcgacgttgtttcagacaacggaatgcaagtgaaagcagtaccgaa
gatgaaattgttgagggtgaaaaaagtggcgaatccagtggacttgaagagtatgagaaa
gaagagttaactcgtcaaaatgatttaaaggaacgtgatgccttcgttaaacgtcttgtt
gaccgggatcagcaacaaactaaaggggtttcttctaggtccgctagtaagcatgaggaa
gctttgagaaaaataacgagtggtgaagttagtcgtgaagaaatgattgccgagctgcgc
aaagcatctagacgaacatatctacgaaaaagacagtctgacaaacttgcagatcttcaa
gctgaaatccaagatgaagaactattttttgaaaatgaagagttaactgagaaggaaaag
gccgaactattatataagaaaactattttggcggttgcgaaatcccatcaacaagcagga
gaactggaaaatatctttcgttattacattcctactgaagaaaagcgaccagaagatcat
gaactcaaaggatctgaaagtaaattaaatgatgaaggcaagagatgggaacaggaacat
ctttcctcggcactttattctttcggtgccaaagacaaagttgaacaagaagtgaaatat
gatcttgttttggatgatgaaatagagtttttaaaaacactaactcgacccggtgccaac
attgaacaagaagtcagtctagacgaagagcaaaaacgaaaagctactgacaaacgtgaa
gccctcaaagaagcaaaacgctcgctcccgatctataaattccgggatgctcttttacaa
gctattgctgatcatcaggttttaatcatagaaggtgaaacaggttctggtaaaacaact
caaattcctcagtatttgtacgaagcgggttattgtaatggaggaaaacgtatcggatgt
acacaaccacgtcgtgttgctgccatgtcagtagctgctcgagtttcacaagaaatgtct
gttagacttggatctgaagtgggatacagtattcgttttgaagattgtacttcagagcat
acaataataaagtacatgacagacggcatgcttttgcgtgaatttctcacagaaccagat
ttgggcagttattcggtaatgattatagacgaagcacatgaacgtacattacatacagat
atactgttcggtttagtaaaggatgtagctcgttttcgatccgatttgaaacttctaatt
agctctgctactttagatgcagaaaaatttgctacattttttgatgatgctcctgtattc
cgaattccaggtcgtcgttatccagttgatatctactatacaaaagctccagaagctgat
tatattgaagctgctatcatatctattcttcaaatacatgtaactcaacctccaggtgat
attctagtctttttaactggtcaagaagaaattgagactgccaatgagttattaatggag
cgtacaagaaaacttgggagtaaaattcgtgaattaataattctacctatttattctagt
cttccatctgatatgcaggcgaaaattttcgcaccgacaccaccaggtgctcgaaaagtt
gtcttagccacaaatatcgctgaaacatcacttacaattgatggtattatttatgttatt
gatactggattttgtaaacaaaaattttatagtgcacgttctggtgttgaatcattaata
gttgttccaatatcacaagctgcagccgatcaaagagctggacgtgctggacgtgtagcc
gcaggcaaatgttttcgtctatacacttcacatgcttaccatacggaattagatccacaa
cccattccagaaatacaacgtacaaatttaggcaatgttgtcttattacttaaatctctt
ggtattgatgatctgctacattttgactatatggatcccccaccacatgatgctttaatt
atggcattagaacaattatacgccttgggtgcattaaatcataaaggtgaactaactaaa
atgggtcgtcaaatggctgaattcccatgtaatccacaattatcaaaaatgattttagct
tcagataagtataaatgttccggtgatattatcactattgcgtctatgctttctgtaaat
aatgccatcttctatagaccgaaagataaattaattcatgcagatactgcacgaaaaagt
ttttctcatatagccggtgatcatattatgctattgaatgtttataatcagtgggcagaa
tctgatttctcttctcattggtgttatgagcagtttattcagtatcgaactatgaaacga
gcccgtgatattcgtgatcaattcgtaggtttgttagatcgtgttgaaattgatctggtg
aataatccacatgaccatgtgaacattcgaaaggctataactgctggatttttctatcat
acagcacgattcactggtgatggttataaaactgtaaaacaaaagcacacaatttatcca
catccaaattcatgtctatctgaagcattgccaaaatgggttatctatcatgaattggta
tatacaactaaggaattcatgcgtcaaattattgaaattgaatcaaagtggctattggaa
gttgcaccgcattattataaagaaaaagaaattgaatatactactgaaaaagtttctagg
aataaaggtaaatcacgtgcagaattggagccaagtgaaggtgtctaa
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