Schistosoma haematobium (urinary blood fluke): MS3_00001716
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Entry
MS3_00001716 CDS
T05004
Symbol
ZNHIT1
Name
(RefSeq) Zinc finger HIT domain-containing protein 1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
MS3_00001716 (ZNHIT1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
shx00536
]
MS3_00001716 (ZNHIT1)
Glycosaminoglycan binding proteins [BR:
shx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
MS3_00001716 (ZNHIT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
24595668
NCBI-ProteinID:
XP_051074623
UniProt:
A0A922LXK8
LinkDB
All DBs
Position
1:complement(58537525..58606211)
Genome browser
AA seq
1668 aa
AA seq
DB search
MYLYRWTKNNQLQVYLTSFVWIFLLSNTPVNSFLERLQTAPQGTLDVLTAVRVSEQAYVQ
TSPGRCRQDSNDLATSSNVAERNVAYSVPRGLSLYIEGRSLIPDPFPPDLSILFTIRLES
NLEKEFFALYDRHGRMILRIIIGSHLQLEYLSKESQSSQLSDVHPRDLKAHSGKTLEKAI
FKTHLNDGLWHRVAVSIGTTTVRLLVDCKQRESINYNRSSTSIDNRGRIQVLKDGIHGFI
EDFYLLPGEEGAVKQCDVYSPNCFDDQMMGDEGDKDTDPMQGPTGSMGDSGPPGDKGEPG
LNGSSVPAGEPGPLGPMGSLFIIPLNLGVGSSSFARAATFRDLLQKHLLSLKGVRGARGM
TGVTGPEGGPGEPGVKGEVGHPGDTGYQGPRGPMGPPGRQGSSGPPGLDGSRGEPGPSGM
KGEDGRPGDSGLIGLKGDKGELGPPGPKGDQGLPGEEGPRGPHGDIGDQGDPGLPGVRGP
VGQPGPQGPRGKPGNQGPRGRKGELGEPGLPGLPGPAGPVGTSGPEGMAGPRGPTGIAGQ
RGRSGPSGVPGTDGLPGFPGPKGDVGPKGDTGPNGSKGDTGIQGPRGYKGERGRSGPEGA
KGESGKPGPGGVPGDPGPKGVKGDVGISGPVGSPGVTGMKGDPGPPGPVGQRGDPGTKGL
PGAIGIPGPPGPDGERGPPGLTGRRGRGGDKGDIGPPGSPGETGQQGQRGAPGPRGPPGR
FGPPGMKGDAGPVGPVGSVGPIGEQGLQGPVGPPGPIGPPGSTGREGPVGFPGPRGEPGE
RGPAGQPGSLGNTGPPGPIGDPGPEGQQGPVGPTGPTGDPGKDGMPGRDGQPGSKGVRGS
PGVLGNQGVRGFPGFDGMPGRPGPAGVKGEIGPDGEVGPIGDKGYQGDVGIIGPIGPTGP
LGARGPPGPAGVKGLTGEDGPLGLIGSPGPRGPPGRLGPIGPLGPPGFDGEKGDKGASGP
PGPKGDKGGVGIRGPFGPVGSPGLPGIQGPPGLPGQAGEEGPEGLVGPEGSRGLPGAPGA
SGMVGVTGLPGIAGEKGDQGSRGPIGRRGLPGTVGVPGPAGQPGNVGAPGPVGQQGERGT
QGEDGPPGPRGVEGSPGVQGPLGPKGQEGPRGPQGVPGDIGIPGSDGPKGELGPLGIPGP
QGPTGPPGPKGVQGPVGEDGSPGPQGPLGKQGLRGLPGPLGPPGPPGMTGPQGRTGPQGP
KGVKGETGEQGVPGEPGRVGPVGSPGPPGSLGSPGQQGVPGVMGKQGKTGERGSEGLQGK
QGDPGIQGDRGPKGSKGTYGPVGPLGPPGPKGEQGVPGLEGVRGVVGLKGERGPVGPAGD
PGQPGPSGPVGPEGPAGHPGPPGLPGVPGQKGSSGPAGPPGPPGPIKVLDMSEGYYRFED
TPRVRRSISDALYNNQYYSKQDPDESITPNTIPSVGAVLRRIYARIESLEASMNSFERPM
GTQQNPARHCRDIYEAADFPETSKSGTYWIDPNLGSPTDAFTVECRFQNKGNVAETCIKP
SEDTKTQPLTNFVKTNNSEDWWISHLKQQKQNGTMHKTQLYYAPINQIRYLQLLHSKAEQ
VITFTCRNTPVYFDVKNQNYKNAVIVKLFDENVIDTYEDRRTRTIGGGIMLDIKVKDECM
ERSKQKASSVFEFVTRKPNLLPLVDIQLKEFGESDQEIGYYMDAVCFS
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgtatcgttggactaagaacaatcaacttcaagtatacttaactagttttgtg
tggatttttctactatctaacactcctgtcaatagctttttagagagattgcaaacagca
cctcagggtacattagacgtattaactgcagtaagagtcagtgaacaagcatatgtacaa
acttcacctggtcgatgtcgtcaagattcgaatgatttggcaacatcatcaaatgttgca
gaaagaaatgtagcttattctgttcctcgtggattaagtctttacatagaaggtcgatct
ttaatccctgatccatttcctccagatctgtctattttatttactattcgattggaatcc
aatttggaaaaagagtttttcgctctttatgatcgacatggacgaatgattttacgcata
ataattggctcacatttgcaattagaatatttatcaaaagaatcacagtctagtcagctt
tctgatgtgcatcctcgagatttaaaagcacattcaggaaaaacattagagaaagctatt
tttaaaactcatctaaatgatggcctatggcatcgtgtagccgtcagtattggtactact
accgtaagattacttgttgattgtaaacaaagggagtccataaattataatcgttcatca
acaagcattgataacagaggtcgaatacaagtattgaaagacggcattcatggttttatt
gaagatttttatcttctacctggtgaagaaggtgctgttaaacaatgtgatgtttattca
cctaattgttttgatgatcaaatgatgggggatgaaggagataaagatactgatccaatg
cagggtccaacaggttctatgggagatagtggtccaccaggtgacaaaggtgaaccaggt
ttgaatgggtcatccgtacctgctggtgaacccggtccacttggtcctatgggttcccta
ttcatcattcctctcaatctaggcgtcggtagtagtagttttgcacgggcagctacattt
cgagacctgcttcaaaaacatttgctttccttaaaaggtgtacgtggagctagaggaatg
actggtgtgactggtccagaaggaggtcccggtgaacccggtgttaaaggagaagttggg
cacccaggtgatacgggataccaagggcctcgtgggccgatgggtccacctggacgccaa
ggttccagtggaccaccgggattagatggtagtcgtggagaacctggtccatcaggaatg
aaaggagaagatggacgccctggtgattctggacttataggccttaaaggagataaaggt
gaattagggcctcctggtcccaaaggtgatcaaggtctcccgggtgaagagggaccacgt
ggacctcacggagatattggggatcaaggagatccaggtctgcctggagtacgtggtcct
gtgggtcagccgggtccacagggtccgaggggaaaacctggaaatcagggaccacgggga
cgtaaaggtgaacttggggaacctggtctaccaggtttaccagggccagcaggtcctgta
ggaacatctgggccagaaggtatggctggtcctcggggcccaacaggtatagctggtcag
aggggacgctctggtccctcaggagttccaggtactgatggtctcccaggatttccaggt
cccaagggagatgtaggacctaaaggagatacaggtccgaatggatcaaaaggtgataca
ggtattcaaggaccaagaggttataaaggtgaacggggtcggtccggtcccgaaggtgca
aaaggtgagagtggcaaaccagggcctggaggagtgcctggagatccaggtccaaaagga
gtgaagggagacgttggaatatctggccccgtaggatcgccaggagttacaggtatgaaa
ggtgacccaggtccacctggtccagttggacaaagaggagaccccgggaccaaaggttta
ccgggcgctatcggcattccaggtccacccggtccagacggggaaagaggtccaccaggt
ttaactggaagacgaggtcgaggcggtgacaaaggagacattggacctccaggttcacca
ggtgaaacggggcagcaagggcaaagaggggctcctgggccaagaggtccaccaggaaga
tttggcccgccgggaatgaaaggggatgctggtccggttggcccagttggatccgtcgga
ccgattggtgaacaaggtcttcaaggtcctgtcggacctcctggaccaataggaccacca
ggttcaactggaagagaaggacctgttggatttcctggaccacgtggagaaccaggtgaa
cgtggaccagcagggcaacctggtagtcttgggaacactggaccaccgggtcctataggc
gatccaggacctgaaggacaacaaggtccagtcggaccaacaggtccaactggagatcct
ggaaaggatggtatgccagggcgtgatggtcagcctggttctaaaggtgtaagaggttca
ccaggagtacttggcaatcaaggtgttcgaggattcccgggatttgatggcatgccaggt
cgacctggaccagctggtgtgaaaggtgaaataggacctgatggtgaagtgggacctatt
ggagataaaggctaccaaggtgatgttggtattatcggacccatcggaccaacaggtccg
ttgggagcaagaggcccacctggtccagctggagtcaaaggtttaaccggtgaagatggt
cctttgggactaataggatctcctggaccaaggggaccacctggtcgattaggtcctatt
ggaccgttagggcctcctggttttgatggggaaaagggcgataagggtgcatcagggcca
ccaggaccaaaaggcgataaaggaggagtgggtatacgtggaccttttggaccagttggg
agccctgggttacctggaatacaaggaccaccaggactccctggacaagcaggtgaggag
ggacctgaaggattagttggtccagaaggatctcgaggattgccaggagcaccaggtgca
tctggaatggtaggtgtgacaggtctaccaggaatagccggagaaaaaggagaccaggga
tcacggggtcctataggtcgacgcggtttacccgggacagttggagtccctggcccagct
ggccaacctggaaatgttggagcacctggtcctgttgggcaacaaggagaaagagggact
caaggagaagatgggccaccaggacctcgaggtgttgaaggaagtcctggagtacaggga
ccactaggaccaaaaggtcaagagggtccccgtgggccacaaggagtacctggtgatata
gggatcccaggatctgatggaccgaaaggagagttgggtcctttaggaatacctggacct
caaggaccaacaggacctcctggaccaaaaggtgttcaaggaccagttggagaagatgga
tctcctggaccgcaaggtcctcttggaaaacaaggtttaagaggtctacctggacctcta
ggaccacctggacctcctggtatgacgggtcctcagggacgtactggacctcagggtcct
aaaggtgtaaaaggtgaaacgggtgaacaaggagtacctggtgaaccaggacgcgttggg
ccagtgggatcccctggacctccaggatctttgggcagtcctggccaacaaggtgtacca
ggggtaatgggtaaacaaggcaagacaggagaacgaggatcagagggactgcaaggcaag
caaggtgaccctggtatacaaggtgaccgtggtccaaaaggtagcaaaggaacttatggt
ccagtcggtccattggggcctccgggaccaaagggtgaacaaggtgttcctggacttgag
ggcgtacgaggagtggttggtctcaaaggagaaaggggtcctgtcggacctgccggagat
ccaggacaaccaggtccatccggaccagttggtcctgaaggtccagctggacatcctggt
cctccagggttacctggtgttccaggtcaaaagggttcatctggtccagcaggaccaccg
ggacctccgggtccaatcaaggtcttagatatgagtgaaggttattataggtttgaggat
acacccagagttagacgtagtatttcagatgctctatacaataatcaatattattcgaaa
caggatccggatgaaagtattacaccgaatacaataccatcagttggtgcagtactacgt
cgtatatatgcaagaattgaaagcttagaagcatctatgaatagttttgaacgtcctatg
ggtacacaacaaaatccagctagacattgtcgtgatatatatgaagctgctgattttcca
gaaacttctaaatctggtacttactggattgatccaaaccttggttcaccaactgatgca
ttcacagttgaatgtagatttcagaataagggaaatgttgctgaaacatgcattaaacca
agtgaagatacaaaaacacaacctcttactaattttgttaaaacgaataattcagaagac
tggtggatttcacatttaaaacaacagaaacaaaatggaacaatgcataaaactcaatta
tattatgcaccaataaatcaaattcgttatctacaactattacattcaaaagctgaacaa
gtgatcacttttacatgtcgtaatacaccagtatattttgatgtgaaaaatcaaaattat
aagaatgcagtaatcgttaaattatttgatgaaaatgtgattgatacttatgaagataga
cgtacacgtactattggtggtggtattatgttagatatcaaggttaaagatgaatgcatg
gaacgaagtaaacaaaaagccagtagtgtatttgaatttgtcacccgtaaaccaaactta
cttccattagttgatattcaattaaaagagtttggagaaagtgatcaagaaattggatat
tatatggatgctgtttgtttcagttaa
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integrated database retrieval system
