KEGG   Schistosoma haematobium (urinary blood fluke): MS3_00001873
Entry
MS3_00001873      CDS       T05004                                 
Symbol
POLR2H_1
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC3, variant 2
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
shx  Schistosoma haematobium (urinary blood fluke)
Pathway
shx03020  RNA polymerase
shx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:shx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MS3_00001873 (POLR2H_1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    MS3_00001873 (POLR2H_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:shx03021]
    MS3_00001873 (POLR2H_1)
   03400 DNA repair and recombination proteins [BR:shx03400]
    MS3_00001873 (POLR2H_1)
Transcription machinery [BR:shx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     MS3_00001873 (POLR2H_1)
  RNA polymerase III system
   RNA polymerase III
     MS3_00001873 (POLR2H_1)
  RNA polymerase I system
   RNA polymerase I
     MS3_00001873 (POLR2H_1)
DNA repair and recombination proteins [BR:shx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MS3_00001873 (POLR2H_1)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 24589331
NCBI-ProteinID: XP_012793192
UniProt: A0A095AHI1
LinkDB
Position
1:65154059..65158374
AA seq 156 aa
MSALLEDIFDVKDVDKDGKKFDKVSRLFCESESFKMGLILDIHALIYGLSKGDKFRMVLT
KTLLNELGTDADDDDEDDAADETDEKLANSKMAEFDYVCYGKIYRIETQDSGVDSSRLSC
YVSFGGLLMQLTGDASNLQGFRVGKHLYLMIKKLAF
NT seq 471 nt   +upstreamnt  +downstreamnt
atgtccgctcttttagaggacattttcgacgtaaaagatgttgataaagatggaaaaaag
tttgacaaagtatcaagattgttttgtgaaagtgaatcattcaagatgggattgattttg
gatattcatgccttaatatatggtctttcaaagggtgacaagtttcgaatggtgcttacc
aaaacgttgttgaatgaactggggacggatgctgatgacgatgatgaagacgatgcagca
gatgaaactgatgagaagctagcgaacagcaagatggcggagttcgattatgtatgttac
gggaagatttatcggatagaaacccaagatagtggagttgactcgagtagattgtcatgt
tatgtgtcttttggtggattactcatgcaactaacaggagatgctagcaatttgcaaggt
ttccgtgtcggaaaacatttgtatttaatgataaagaagttggcattttga

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