Schistosoma haematobium (urinary blood fluke): MS3_00002012
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Entry
MS3_00002012 CDS
T05004
Symbol
THOC5_1
Name
(RefSeq) THO complex subunit 5
KO
K13174
THO complex subunit 5
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03013
Nucleocytoplasmic transport
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00002012 (THOC5_1)
09122 Translation
03013 Nucleocytoplasmic transport
MS3_00002012 (THOC5_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00002012 (THOC5_1)
03041 Spliceosome [BR:
shx03041
]
MS3_00002012 (THOC5_1)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
MS3_00002012 (THOC5_1)
Spliceosome [BR:
shx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MS3_00002012 (THOC5_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
MTUS1_CCDC69_CC1
RWD
DUF4834
Motif
Other DBs
NCBI-GeneID:
24590941
NCBI-ProteinID:
XP_012794852
UniProt:
A0A094ZM20
LinkDB
All DBs
Position
1:70490794..70525119
Genome browser
AA seq
742 aa
AA seq
DB search
MSNKGKSQDEALNNENSKSTNSFYHEENSVKLDGSAHDLLQFRDCCESLREFIKNTWQRK
KSQEKINASQFAFLMISIKELNRRTQFRIRKSREITAENKNKVDQLHLGLQNLLYEVAHL
ENEIQTCLEFRSLHEDIKLIPVEEFYEKTGRKVGSLSEHQETLERLHWELEQRKALSDSC
DKLKSAVESTSQTIKKKRNYLASFGPKLKDVAESTLIIQELMDLPFTNENEQYNLAFLLP
SPLYILYSLLKSYISMSGKKSEFSVSIEGDSELAKAVNQTTEQTESQSSPQEADDSDVDD
GEGNKKRKKKRYATECIDDTDKEFINEKTIKFHPLTVSLTVSVPKNSDIPLSERGFSIKL
SFAWMLDLHLVTVRLQFSADKTASLPRSKTGNSLLNSEQLLSSLQWSCDQLRFGGCSSDI
PILFLPNSQKSITWNACEFVGRPYSWAQQLSGINCFPDRLSDNKLCERSPKSADSEHFGE
IESWLKSLQSRIIDRLYLIEELSEIERCNLLLSPEQQQLIPSDVELHIIRWKNSDFETLQ
SVPRAQVMIALNVIRSEDSVFQCHIGRDENYFVTVWVCIPPQYPHKAPLLIMDGLINFVS
PSGTHNTEDVVTDLSDLHIQELETEVNCYWQEFFTSSIYQNNSHTVVNDVDNTNDITSNN
IINSDKSFYNGNQCVGLSKWNRNILSCQLARCAACIDALCRDQIIWKNSLKSTNSSCVRS
VRYPTRSRPLRYLPSPGAFVHR
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaaggcaaatcacaagatgaggctctcaataatgaaaattcaaagtcaaca
aattcattctatcatgaagagaattctgtgaaattggatggaagtgctcacgatctttta
caattccgagattgttgtgaatcattacgcgagttcataaaaaatacatggcagcgtaaa
aaatcacaggagaagattaatgcttcgcagtttgcctttctgatgatatctatcaaggag
ttgaacagaagaactcagtttaggattcgaaaatctcgagaaataactgcagagaataag
aataaagtggatcagttgcacttaggtttgcagaatcttttatatgaagtcgctcacctt
gaaaatgaaattcaaacatgtttagaatttaggtctctacatgaagatataaaattaatt
ccggtagaagagttctatgagaaaactgggcgcaaagttggaagcttatcagaacatcag
gagactttggagcgtcttcattgggagcttgaacaacgaaaggctttatctgactcttgt
gataaactaaaaagtgctgttgaatctacttcacaaacaattaaaaagaaacggaattat
ttagctagttttggtccaaagttgaaggatgttgctgaaagtactttaattatccaggaa
ctaatggacttaccatttaccaacgagaatgaacagtataatttggcgtttcttctacct
tcaccactgtacattctgtattctctcttaaagtcatacatatctatgtcaggaaaaaaa
tcagaattttctgtatcaatcgaaggtgattcggaattggccaaagctgttaatcaaaca
acagaacaaacggaatcccagtcttcaccacaggaagctgatgattctgatgtagatgat
ggagaggggaataaaaaacgcaagaagaaacgttatgcgacagaatgcatcgatgataca
gataaagagtttatcaatgaaaagactattaaattccatccattaactgtttcgttaacg
gtttctgtccctaaaaattcagatataccattgagtgaacgtggttttagtatcaaatta
tcattcgcttggatgttagatttacatctggtaacggtgagattacagttttcagcagac
aaaactgcttcacttccccgatcaaaaactggaaatagcttgcttaattctgaacagctt
ttgtccagtttacaatggtcttgtgatcaacttcgcttcggtggttgtagttcagatata
cctattttatttcttcctaattcacaaaaatcgattacatggaatgcatgcgaattcgtc
ggacgaccatattcgtgggctcaacaactatcaggcattaactgctttccagataggtta
tctgataataaattatgtgaacgatcaccaaaatctgccgattcagaacattttggggaa
attgaatcttggttaaaatctcttcaatcgcgaattattgacagactatatcttattgaa
gagctttcagaaattgaacgctgcaacttgttgttatcacccgagcaacaacagttaatc
ccctctgatgttgaacttcacattattcggtggaagaattctgatttcgaaactttacag
tccgttcctcgtgctcaggttatgatagctttaaatgtaattcgttctgaagactcagta
ttccagtgtcacattggaagagatgaaaactattttgtcactgtatgggtctgtatccca
cctcagtatccacataaagcgccattactaattatggacggtctaatcaattttgtcagt
cccagtggtacacataatacggaggatgttgtcactgacttatctgatcttcatatacag
gaattagaaactgaagtcaactgttattggcaagaatttttcacttcatctatatatcaa
aataatagtcatacggttgtaaacgatgttgataatactaatgatattacttctaataat
attataaattccgataagtcgttttataatggtaatcagtgtgtcggattaagtaaatgg
aatcgaaatatattatcttgtcagttagctagatgtgctgcttgtatcgatgcattatgt
cgtgatcaaataatttggaaaaattcgttgaaatcaacaaacagttcatgtgttcgttct
gttaggtatccaacaagaagtcgtcctcttcgttacttaccttcaccgggtgcatttgtt
catcgttaa
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