Schistosoma haematobium (urinary blood fluke): MS3_00002136
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Entry
MS3_00002136 CDS
T05004
Symbol
DHX8_1
Name
(RefSeq) ATP-dependent RNA helicase dhx8, variant 4
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00002136 (DHX8_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shx03041
]
MS3_00002136 (DHX8_1)
Enzymes [BR:
shx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MS3_00002136 (DHX8_1)
Spliceosome [BR:
shx03041
]
Complex C
Other components
Step II factors
MS3_00002136 (DHX8_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
GIPC1_GH2
Cas3-like_C_2
T2SSE
PhoH
TsaE
PWI
AAA_7
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
24589708
NCBI-ProteinID:
XP_035588261
UniProt:
A0A922LYG4
LinkDB
All DBs
Position
1:complement(76085668..76133560)
Genome browser
AA seq
1393 aa
AA seq
DB search
MSYLFAPSSTNNLRGHSKKVRKPRSNKLKVVSRFSHRVVNDWNALPEQVSAPSVILRSLL
EIADCSRLVSLLEFSKSNTVMVVESDDSGFRQLEYFSLVSKVCTELTNHLGLDDKVLAEF
VIHLAKKNPTFEKFKSALEKKGAEFTDPLIASILRLVEKMLPKKEKVTKKKALTSSSNKK
DSELDVVKNKLELRKRLLPALCMPNEDPNDERLNVESENVEPCSDTDKKDGIRNKFVHPD
ELEEEFHSDNINNKKDCVDDVEALAMIKDLELLLSGAKEASLSKSKPRDEKKSEDRRARR
SHSKSPHRSRHSNRRAHQRNPDASSDYRGHRKKSRSPHGKESRSPSPHSSRHRSKDHSPA
NKSSYHRDRSRADHISPKRYSHSSSSPNYESKRLKDLPSEPIVGDIYRGRVTNVLAFGAV
VQLDGLRKRWEGLVHISQLRQEGRVASVGDVVNRNQKVWVKVISFTGTRTGLSMREVDQE
TGADLNASRLPEKKSNNSSESLDKDKIRLVDEEDIDGVRNPDRPAANSGPGFFGRRKEMG
FEEDIESGPKRKVQRISSPERWELKQMMSAGVIEKTELPDFDEETGLLPREDEESDEDIE
IELVEDEPPFLKGHGRHAMDLSPVRIVKNPDGSLQQAAMMRQALQKERREMKQQERQNQV
TAERETAPERMGKDWHDPMGFTLDNEPQFSGSRSTDQFKDVPEWKRAVQGGTRTGAVGKK
IVRSILEQRQALPIFRLKDELMKAVNDNKVLIVIGETGSGKTTQITQYLAEAGYVNTGRI
GCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTAPETKIKYMTDGMLLRECLID
PDLRQYSVIMLDEAHERTIHTDVLFGLLKKAIQKRDDMKLIVTSATLDSVKFSQYFFEAP
IFTIPGRTYPVEILYSLEPENDYLDAALNTVMQIHLTEPPGDILVFLTGQEEIDSGCELL
YERMKALGSEVPELIILPVYAALPSEMQSRIFDPAPPGSRKVVIATNIAETSLTIDGIYY
VIDPGFVKQKVYSSKSGMDQLIVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEML
ATNVPEIQRTNLASTVLQLKAMGINDLLSFDFMDPPPLQTLVAAMETLHGLSALDDEGLL
TRLGRRMAEFPLEPMLSKMLIMSVHLQCSEEVLTVVSMLSVQNVFYRPKEKTELADQRKA
KFHQPEGDHLTLLAVYNAWKNNKFSAPWCYDNFLQARTLKRAQDVRKQLLGIMDRHKLDV
VSCGKKTALAQKAILSGFFRNAAKKDPQEGYRTLVDQQVVYIHPSSALFNRQPDWVVYHE
LVMTTKEYMREVTTIDPRWLVEFAPNFFKFGDPTKLSRTKKSMRIEPLFSKFEEKDSWRI
SRVPRKFHVKVTF
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatctttttgctccctccagcactaataatctccgaggtcatagcaagaaggtt
cgtaaaccacgatctaataaacttaaagtggtgtcccgtttttctcatcgagtagtcaat
gattggaacgccttacccgaacaagtatcagccccatcagtgattttgagatcactgctt
gaaatcgctgactgttctcgattggtttcgttattagagtttagtaaatcaaacaccgta
atggttgtcgaatcagacgactctggttttcgccaactggaatacttctctttagtttca
aaagtttgcacagaattaacaaatcatttgggtttagatgacaaagtcctggctgaattt
gttattcatttggctaagaaaaatccgacttttgaaaaattcaaaagtgctttggaaaag
aaaggcgcggagtttacggacccattaatagccagtattttacgcctagttgagaaaatg
cttccaaagaaggagaaagttactaaaaagaaggcattaacatcttcatctaacaagaaa
gattctgagttagatgttgtcaaaaacaaactagaattgagaaagcgacttttacctgct
ttgtgtatgccaaatgaagatccaaacgacgagcgattgaatgtggaatctgaaaatgta
gaaccgtgcagtgatactgataaaaaggatgggattcgtaacaaattcgttcatcctgat
gaactggaagaggaattccatagtgataatatcaataataaaaaagattgtgtagatgac
gtcgaagctttggctatgattaaagacttggaattattgttatccggtgctaaggaagca
tcattatctaagtcaaagccacgtgacgaaaagaaaagtgaagatagacgtgctcgtcgt
tcacattctaaatctcctcatcgttcacgacattcaaatcgaagggctcatcaaagaaat
cctgatgcatctagtgattatcgtggtcatcgtaaaaagtccagatcacctcatgggaaa
gaatccagatcgccgtcgccccactcctccagacatcgatctaaggatcattctccagct
aacaaatcgtcttatcatagagaccgatcacgagctgatcatatttcacctaaaaggtat
tctcatagttcaagtagtccaaattacgaaagtaaacgactaaaagatcttccttcagaa
cctattgtgggcgatatctatcgtggtagagttacaaatgtgctagcatttggagctgtt
gttcagttagatggacttcgtaagagatgggaaggtctggtgcatatttctcagctacgt
caagaaggtcgtgtggccagtgttggcgatgttgttaatcgcaatcaaaaggtctgggta
aaagttatctcgttcacaggtactcgaactggtcttagtatgcgtgaggtggaccaagag
acgggtgctgatttgaatgcttcacgcttacctgagaagaaatccaataattctagtgaa
tcgttagataaagataaaatacgtctcgtagatgaagaggatatcgatggtgttcggaat
cctgatcgtcctgcagctaactctggaccaggatttttcggtagacgcaaagaaatggga
tttgaggaagacattgaatctggtcccaaacgaaaggttcaacgaattagtagtccagaa
cgctgggaattaaaacaaatgatgtcagctggtgtaattgaaaagacagaattacctgat
ttcgatgaagagactggacttttaccacgtgaagatgaagaatctgacgaagatattgaa
atcgaacttgttgaagatgaaccaccatttcttaagggtcatggtcgacatgcgatggat
ttgtctccagttagaatagtcaagaatccagacggatcattgcaacaagctgccatgatg
agacaagctctacaaaaggaaagacgtgaaatgaaacaacaagaaagacaaaaccaagta
acagctgaacgagagactgctcctgaacggatgggtaaagattggcatgatccaatgggg
tttactttggacaatgaaccacagttttcaggttcacgttcaactgaccagtttaaagat
gtaccggaatggaaacgtgctgttcaagggggtacaagaactggagctgttggtaaaaag
attgtacgatctattcttgaacagcgtcaagccttacccatattcagactaaaagatgag
ctaatgaaggcagtgaatgataataaagtattgattgttattggagaaactggtagtggg
aagactacccaaataacacaatatctagctgaagcaggttatgtcaacactggtcgcatt
ggatgcactcaaccacgtcgagtagcagctatgtctgtagctaaacgcgtatctgaagaa
tttggttgtcgtctagggcaagaagttggttatacaatacgttttgaagattgtactgca
ccagagacaaaaatcaaatacatgacagatggtatgctgttacgtgaatgccttattgat
ccggatttacgccaatattcagtaattatgttggatgaagcacatgaacgaacaatacat
acagatgtattatttggtttattgaaaaaagctattcaaaaacgagatgatatgaagtta
attgtcacttcagctactcttgattcagtcaaattttctcagtacttttttgaagctcct
atattcactatacctggtcgtacatatcctgttgaaatattgtatagtttagaaccagaa
aatgattatctagacgctgcactcaatacagttatgcaaattcatttaactgaacctcca
ggagatatattagtatttttaactggtcaagaagaaatcgactctggttgtgaacttctt
tatgaacgtatgaaagctttaggctctgaagtacctgaattaatcattttaccagtttat
gcagctttaccatctgaaatgcaatcgagaatttttgatcctgcacctccaggctcccgt
aaagtagtgattgctacaaatattgctgaaacatctttaacaattgatggaatttattat
gttattgatccaggttttgtaaaacaaaaagtgtacagtagtaaatctggtatggatcaa
cttattgtcacaccaatttcacaggctcaagctaaacaacgtgctggacgtgcaggtcgt
acaggtcctggaaaatgttatcgtttgtatactgaaagagcctacagagatgaaatgtta
gcgaccaatgtaccagagattcaaagaacaaatctagcaagtacagttttacagttgaaa
gccatgggtataaatgatttattgtcatttgactttatggatcctcccccattacagaca
cttgtcgctgctatggaaactttacatggtttatctgctctggatgatgaaggattgttg
acacgtcttggaagaaggatggctgaatttcctcttgaaccaatgctttctaaaatgtta
attatgtcagtgcatttacaatgttctgaagaagtattaactgtcgtttcaatgttatct
gttcaaaatgttttctatcgtcctaaggagaaaactgaattggctgatcaacgtaaagcg
aaatttcatcaacctgaaggtgatcaccttactctattggctgtatacaatgcatggaag
aataataaattctctgcaccatggtgttacgacaattttctgcaagcaagaacattaaaa
cgtgctcaagatgtacgcaaacaattgcttggtattatggacagacataagcttgatgta
gtttcatgcggtaaaaagactgcattagcacagaaagcaattttgtctggattctttcgt
aatgctgcaaagaaagatccacaagaaggttatcgtacgctggttgaccaacaagttgtt
tatattcatccatcatctgcattatttaatagacaaccagattgggttgtttatcatgaa
ctagttatgactactaaagagtatatgcgtgaagtaaccacaatcgatccaagatggtta
gtagaatttgcaccgaatttcttcaaatttggcgatccaactaaattatcacgtactaaa
aagtcaatgcgaattgaaccattgttcagtaaatttgaagagaaagattcatggcgtatt
tcacgtgttccaaggaaatttcatgttaaagttacattttaa
DBGET
integrated database retrieval system
