Schistosoma haematobium (urinary blood fluke): MS3_00002602
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Entry
MS3_00002602 CDS
T05004
Symbol
HBS1L_1
Name
(RefSeq) HBS1-like protein, variant 2
KO
K14416
elongation factor 1 alpha-like protein
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MS3_00002602 (HBS1L_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00002602 (HBS1L_1)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MS3_00002602 (HBS1L_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
MMR_HSR1
G-alpha
Motif
Other DBs
NCBI-GeneID:
24597640
NCBI-ProteinID:
XP_051070170
UniProt:
A0A922LLY0
LinkDB
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Position
ZW:complement(3526721..3545651)
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AA seq
671 aa
AA seq
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MSRHRNIRALCDDDVDTYDEAFASSVDDDYTISPNTSERYIYNPDSVFKQDISVSLKNVK
PLSFTAEDFPENDSKNLKPEDSPGVVSGRIGSCQAFDFSAPKTNEVTGQNDSVHGSDEVF
GNSDLFDSTLCVPQARPTEGINHADTSLLNLSLSQKLTISSHSDERSNFLRTPGNNSATP
SKPIDRHSLVNEYSKLHKESAEKEIINLIVMGHVDAGKSTLMGNLLCLLGHVSSKQLAKY
QWDAQKLGKASFAYAWILDQTSEERNRGVTMDIAQTSFETKSKRVALMDAPGHKDFVPQV
IGGATQADAALLVINATRGEFETGIGAGGQTREHARLARLLGVSRLIVAVNKMDTVEWCQ
SRFNEIQTQISSFLKSMNFSGVVYCPVSGLVGANLVPQNLSNSSKNTSETGSNLFAWYTG
PSLLELIDSIPSPDRTVDGPFRFVVSDIFKPAGSSVPMVAGRVISGAISSGVNIPTSKVI
CLPSDVRTCVKSIRSLCNTRTGQNDAEGDLGGKLLDQVVKFAFAGDQVALMLTDIDPFQT
LIPGDLLTDPDNLIQPSTCISAKLLVFSIQQPITKGYPVIYYYNCANVAATITKLKSMTR
RENKMEKVVRKPRCLLGNCTANVELTFERPICIEVYEKCKPLGRFMLRVGGESIAGGTVT
KLIPSKKEPSC
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcacagaaacataagagcgttgtgtgatgatgatgtcgatacttatgacgaa
gccttcgctagttcagttgatgatgactatacaatatccccgaacacatcagaacgatac
atatataatccggacagtgtattcaagcaagacatatcagtatctttaaagaatgtcaaa
ccattaagtttcacagcggaagatttcccggaaaatgattccaaaaaccttaaaccagaa
gattctcctggagttgtgtctggacgaatagggtcttgtcaggcatttgatttctccgca
ccaaaaactaacgaagttacgggtcaaaatgatagcgtgcatggctctgatgaggtgttt
ggcaacagtgatctttttgactcaactttatgtgtacctcaagcacgtcctacggaaggg
atcaatcatgctgatacatcattattaaatttatctctttctcagaaattgactatctct
agtcattctgatgaacgttctaacttcttacgtactccgggcaataattcagcaactcct
agtaaacccattgaccggcattctttggtaaacgaatattctaaattgcataaagagtca
gcagaaaaagagattattaatcttatcgttatgggacatgtggatgctggtaaaagtact
ctaatgggaaatctactttgtttgttgggacatgtttctagcaaacaattagctaaatac
caatgggatgcacaaaaactgggcaaagcatcattcgcctatgcatggattctagatcaa
acttcagaggaaagaaatcgtggcgttacaatggatattgcacaaacttcatttgaaaca
aaatcaaaacgagttgctctaatggatgctcctggacataaggattttgttccacaagtt
attggcggtgcgactcaagctgatgctgctctcctagttatcaatgctactcggggtgaa
tttgaaactggaattggtgctggaggtcagacaagggaacatgctcgattggctcgttta
ttaggagtttctcgtttaattgtcgctgtaaacaaaatggatacagtagaatggtgtcag
tcacgattcaatgaaattcagacacaaatatctagttttttaaaatctatgaatttttcc
ggagttgtgtattgtccagtatctgggttagtcggggctaacttagtacctcaaaacttg
tccaatagcagtaaaaatacgtcagagacaggttctaacctgtttgcgtggtatacggga
ccttcgttactcgaacttatcgattcaattccatcaccagatagaactgttgacggacct
tttcgttttgttgtcagtgatatatttaaacctgctggttccagtgtaccaatggttgct
ggacgagttatatctggagctatttctagtggtgtaaatatacctacaagtaaagttatt
tgtttgccaagtgatgtacgaacttgtgtgaaatctatcagatcattgtgtaatactcgt
acaggtcaaaatgatgctgaaggtgatcttggaggcaaattgttagatcaagttgttaaa
tttgcatttgccggtgatcaagtggcgttgatgttaacagacattgatccatttcaaact
cttattcctggtgatttacttactgatccagacaatctaatacaaccatccacttgtatt
tcagctaaattgttagtattctctatacagcaacctattacgaaaggttatcctgttata
tactattataattgtgccaatgtagccgccactattactaaattaaaatccatgactcgt
cgagaaaacaaaatggaaaaagttgttcgaaaaccaagatgtcttcttggtaattgtaca
gcaaatgtagagttaacatttgaaagaccaatatgtatagaagtttatgaaaaatgtaaa
cctcttggacgatttatgcttcgtgttggcggtgaatcaattgctggtggtactgtaact
aagttaattccatcaaaaaaggaaccatcttgttga
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