Schistosoma haematobium (urinary blood fluke): MS3_00002897
Help
Entry
MS3_00002897 CDS
T05004
Symbol
EIF4A3
Name
(RefSeq) Eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03013
Nucleocytoplasmic transport
shx03015
mRNA surveillance pathway
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00002897 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
MS3_00002897 (EIF4A3)
03015 mRNA surveillance pathway
MS3_00002897 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00002897 (EIF4A3)
03041 Spliceosome [BR:
shx03041
]
MS3_00002897 (EIF4A3)
03009 Ribosome biogenesis [BR:
shx03009
]
MS3_00002897 (EIF4A3)
03012 Translation factors [BR:
shx03012
]
MS3_00002897 (EIF4A3)
Enzymes [BR:
shx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MS3_00002897 (EIF4A3)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MS3_00002897 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
MS3_00002897 (EIF4A3)
Spliceosome [BR:
shx03041
]
Complex C
Other components
EJC/TREX
MS3_00002897 (EIF4A3)
Ribosome biogenesis [BR:
shx03009
]
Eukaryotic type
90S particles
Helicases
MS3_00002897 (EIF4A3)
Translation factors [BR:
shx03012
]
Eukaryotic type
Initiation factors
eIF-4
MS3_00002897 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
AAA_30
Fuseless
Csx12
AAA_19
Motif
Other DBs
NCBI-GeneID:
24595582
NCBI-ProteinID:
XP_051070557
UniProt:
A0A922LMT0
LinkDB
All DBs
Position
ZW:17189409..17208684
Genome browser
AA seq
447 aa
AA seq
DB search
MDTLSESDFNLSESLKSYPTFASMGLKENLLKGIYAYGFEKPSLIQQKTIKQITLGRDLI
AQAQSGTGKTATFSIGTLQNVLPEICQIQVLVLAPTRELAFQIHHVMSSLSDYLSIRCVS
CCGGRNNTMQMARELDKGVHVVVGTPGRILELLRQGNIRLNKLRSLVLDEADEMLNRGLH
DQLEEIYRRLPSHTNSNNKKSLSCQIVIISATMLKEHLELFQNFTSNPVCVLVPRDELSL
SDLQQFYIDVGSEEWKFEALNDLFSSVCVSQTVVFVNTRRKVEWLASQLKREGFTVAAAH
GDLDQSQRESVMKQFRSGECRILISSDMWARGIDVQTVGLVVNFDLPMNTSEYLHRIGRS
GRFGRTGLAVSFIANAEERKQLLEICNYYQIAIPPAPARLDKMLVINNSVHSSPKIANSP
CKSDTSNGQPVKHHQLAKHLKRCIVRQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggatacgttatccgaaagtgacttcaatttatccgaatcactgaaatcttatccaacg
tttgcttctatggggttaaaagaaaaccttttaaaggggatttatgcctacggatttgaa
aaaccctcccttattcaacagaaaactatcaaacaaataactttagggagagatttgatt
gcacaagctcaaagtgggactggaaaaactgcaacatttagcataggaactttgcaaaac
gttctccccgagatctgtcaaattcaagtgctagtcttggcacccacacgcgaattggct
ttccaaatacatcatgttatgtcatcattgtctgattacttgtctatcagatgtgtctcc
tgttgtggtgggcgaaacaatactatgcaaatggctcgcgaacttgataagggagtgcat
gttgtcgttggtactccaggtcgaatattggagcttcttcgacaaggtaacatacgttta
aataaactacgttctttggttttggatgaagctgatgaaatgttaaatagaggattacac
gatcagttagaggagatatatcgccgcctcccatctcatactaattcgaataacaaaaag
tctctcagttgtcaaattgttatcatctcagctacaatgcttaaagagcatttagaattg
tttcaaaatttcacatctaatcctgtttgtgttcttgtaccgagagacgaacttagtctt
tctgatcttcaacaattctacatcgatgttggctcagaggaatggaaattcgaagcgtta
aatgatttattttccagtgtttgtgtttcacaaactgttgtctttgttaatactcgacga
aaagttgagtggcttgcaagtcagttgaaacgagaaggttttacagtggctgctgctcac
ggtgatcttgatcaaagccaaagagagtcagttatgaaacaatttcgttctggcgaatgt
cgtattttaatcagtagtgatatgtgggctagaggtattgatgttcagacagtgggatta
gttgtgaattttgatttgccaatgaataccagtgaatacttacatcgtataggtcgttct
gggcgttttggacgtactggtttggctgttagttttattgccaatgctgaggaacgtaaa
cagcttttagaaatttgcaattattatcaaattgctattccaccagcaccagctcgtttg
gataaaatgttagtcattaataattctgtacacagttcacccaaaatagcaaattcacca
tgtaaatctgatacaagcaacggccaacctgtaaaacaccatcaacttgcgaaacattta
aaacgctgcattgtgcgacaataa
DBGET
integrated database retrieval system
