Schistosoma haematobium (urinary blood fluke): MS3_00003390
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Entry
MS3_00003390 CDS
T05004
Symbol
CASC3
Name
(RefSeq) Cancer susceptibility candidate 3
KO
K14323
protein CASC3
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03013
Nucleocytoplasmic transport
shx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MS3_00003390 (CASC3)
03015 mRNA surveillance pathway
MS3_00003390 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00003390 (CASC3)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MS3_00003390 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
24597757
NCBI-ProteinID:
XP_051071204
UniProt:
A0A922S2M8
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Position
ZW:complement(34997557..35001597)
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AA seq
767 aa
AA seq
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MAFVNGTINRSRSCEEVPLNTDLGQSNYTNLQGYSAKLLVPVNKQFIDHLGSKNLSGPQG
KFRGFGSHYEIYTSKSLNDILDYQMHSGNKTHTLHRHKSLSGLLLNDNFSSNASSSDSLN
DVNYENGHSDEENLPGARKRHGLREVTDNSDDVSGKSVSLVHSCSDFNSYWSENEEGHDV
RNSDDSAVNSVLDGVTKLHVNEKENNSLPQEGTDAADIDFDVDADQDKTNPAYIPRGGRY
YMHDHRTLEEDVVVVKKRESNRRWQHDKFNYYDQAPRSTEEIIWRYGYDIRKENICPFAN
KSDPNDGSNVPTTTSTPCETNEPYHSSHQPSQVTSTKVRNSVLCGNESQKRSARTQGKTI
TYSSIKYNGYSRFTKSDCHGRNFSTRKDSVTDEFQTQASSRPIKEDSVSETNAHRSHPTP
TLDMKSAYSTNTHDSYCKHQQGLNHSYYTSSSNLSRRNREDSSKPPVSNYQYVSKKQAIN
FAPVNTKIRRVYKPQVIKHSSHIREQVKRGERVPKRYSTVRQNVSNIDSSTDKKTPLRLP
SPVHTEESCGSVDVKDLVVTKLSTPGNVDEVTQLHKSAADCKDVIATQDQVCTKITGINT
FSQQKANSQPVSISVHPVSLTDFQPSIEYSRRIPTEYSSVNPHLQTIYCPDIFQHDPRYQ
PPSTMMSNYVLPNAHQAQIHRLYGNGIQNMNLPVPVATTLCFDHVPCGVTNDPSQTYVMH
LGMTAVEPHWNSEEKPVFNRRFPKKPLEVIDPRDGTRVNKVALSETQ
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgttaatggtacaataaatagatctcggtcttgtgaggaagtacctctcaac
acggacctcggtcaatctaattataccaatcttcaaggttactcagctaaacttttagta
cctgttaataaacaatttattgaccacttaggttcaaaaaatctttcgggacctcaggga
aagttcaggggcttcggaagtcactatgaaatctacacttccaaatctcttaatgatata
ctagactatcagatgcactcagggaataagacgcatacacttcatcgacataaaagtttg
tcggggttgcttttgaacgataatttttcaagcaatgcttcgtcgtccgacagtttgaat
gatgtaaactatgaaaacggacattcagacgaagaaaatcttcctggtgcacgcaaacgt
catggtctccgtgaagttactgacaattcagatgacgtctcagggaagagcgtgagtctg
gtacactcatgtagtgatttcaacagttattggagtgaaaacgaggaaggtcatgacgtc
aggaatagtgacgattctgctgtgaatagtgtgctagacggtgtaaccaaacttcatgtt
aatgaaaaagaaaataactcgttaccgcaggaaggtaccgatgctgcagacatagatttt
gacgttgatgctgatcaggacaaaacaaatccagcgtacataccacgaggtgggaggtac
tatatgcatgaccatcgtacactagaagaagacgttgtagtggttaaaaagcgagaaagt
aaccgacgatggcagcatgacaaatttaattattatgatcaagccccaaggtctacagag
gaaatcatatggaggtatgggtacgatattcgtaaagaaaacatatgtccgtttgcaaat
aagtctgatcctaatgatggaagtaacgtccctacgacaacctccaccccctgcgagact
aatgagccataccattcttcacatcaaccgagtcaagtaaccagtaccaaagtgcgaaac
agtgtgttgtgcggtaacgaaagtcaaaagcgttctgctagaacccaaggaaaaaccatc
acatactctagcatcaagtataatggttatagtcgctttacaaagagcgactgccatgga
cgcaatttctccacacggaaagattcagttacggatgagtttcaaactcaagcttcttca
aggcccataaaagaggattctgtatctgaaactaatgcgcatcgcagtcatcctactccg
acccttgatatgaagtctgcttattcaactaacacacatgattcatattgtaaacatcaa
cagggtttaaaccattcatattacacatccagctccaatctttccagacgtaatagggaa
gactcgtcaaagcccccagtctcaaactatcagtatgtcagtaagaaacaggccattaac
ttcgctccagtaaacacaaaaatcagaagagtttacaaacctcaagtaataaaacactca
agtcacatccgcgaacaagtaaaacgtggagaaagagttccgaaacggtattctactgtc
cgacaaaatgtatctaacattgattcatctaccgataaaaaaacaccattgcggcttcca
tctcctgtacacactgaagagtcgtgtggttctgttgacgttaaggacttagtggttaca
aagttaagcaccccagggaatgtagatgaggttactcaactacataaatctgcagcggac
tgtaaagacgtaattgcaactcaagatcaggtttgcactaaaatcactggtatcaacacg
tttagtcaacaaaaagcgaactctcaaccagtcagtatcagtgtgcatccagtttctcta
acagatttccagccctccatagaatatagcagacgtattcctactgaatattcatctgtc
aatccacatttacaaactatatattgcccagatatatttcagcatgatccacgctatcaa
cctccaagcactatgatgtcaaactacgtactacctaatgctcatcaagctcagatacat
cgtttatatggaaatggaattcaaaatatgaatttaccagtgccagtagccacgactctt
tgttttgatcatgtgccatgtggagtcacaaatgaccctagtcaaacatacgtgatgcac
ttaggtatgactgcggtggagcctcattggaatagcgaggaaaaaccagtgttcaaccga
agattcccgaagaaaccattggaagttattgatcctcgtgacggaacaagagttaataaa
gttgccctttctgaaacgcagtag
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