Schistosoma haematobium (urinary blood fluke): MS3_00003565
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Entry
MS3_00003565 CDS
T05004
Symbol
PDE5A_5
Name
(RefSeq) cGMP-specific 3',5'-cyclic phosphodiesterase, variant 2
KO
K15181
negative elongation factor C/D
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
MS3_00003565 (PDE5A_5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shx03021
]
MS3_00003565 (PDE5A_5)
Transcription machinery [BR:
shx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
MS3_00003565 (PDE5A_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Capsid_NCLDV
SSV1_D-63
Motif
Other DBs
NCBI-GeneID:
24591487
NCBI-ProteinID:
XP_035588801
UniProt:
A0A6A5DMQ1
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Position
ZW:complement(40871873..40900986)
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AA seq
637 aa
AA seq
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MEEARAVLKKKDAILEHPSMLAEAIDCIRYNNPQSGHNEAEELLVESYQGAIEFLFELGT
WLTYIDEDAQSTRNIIESVVKEAILQNYDRSKAITCLTDEASADTMEWLSQMVESPTWRQ
TIYNLAQHPRNEDCPFLSLSMPCIAVKESLIGELVSVPLAWNTLGIFLKCVIYVLQPLLA
AGDTVKDQTFMYSIAFLQPKRNNASCTNYSSVSHSEMSMVNSESLPSIDDVKGFVSAVDN
EHQPYSSEGESHFSFDTAQDMLTHFLEMGCHSEHGYLLLQSILQCLARKMKSHCAHHLIW
LLEAEASRRGRDVSRYTTYLCGARDYPDSMDAMRIILKEQDLIPDAVLLLEEAYKGDASP
PVALLRQPIFIALLADALFASSDRLLTEQLEQYAYLYSYAAVVVEEIEPTTERRISCIRT
EVDEAKREVLEASRICRQWNNMSGSGISLRAFRDLPSLLRCLSCRPVSLGVFRFVRVVFH
TKRVDFELNMDTMKPYCIVVNELAEVNEYLRPALLAFITELLASSVEGMEDLSQLEYKRM
LVGLLVHLLSCGHVLPVINTMHRLFLRNRVDVSIVRHFVTEVLKVAGQPYATFFMNALHP
LVVHPDISDGLKGGKDTDYVNEFLEYYEKENSPSPSY
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggccagagctgtcctgaagaagaaagatgccattcttgaacacccgtctatg
cttgcagaagcaattgattgcatccgatataataacccacaaagtggacataacgaggca
gaggagcttttagtggagagctatcagggtgcaatcgagttcctgtttgaactggggact
tggctcacctacattgatgaagatgctcagtctactcgtaacataattgaatcagttgtc
aaggaagctattcttcaaaactacgatcgttccaaagccataacatgtttaacagatgaa
gcttcagccgacaccatggagtggcttagtcaaatggtcgaatctccaacttggcgtcaa
actatttataacctagctcagcatccacggaacgaagattgtccttttttatcactatct
atgccgtgtatagctgtaaaagaaagtctcattggagaactcgtatctgttcctcttgca
tggaacactctgggcattttcttgaagtgcgttatctatgttttacagccattactagct
gccggtgatacagttaaagatcagacatttatgtactccattgcatttttacagccaaaa
cggaataatgcttcatgtaccaattattctagtgtttcacattcagaaatgagcatggtg
aattcggaatcgcttccatctattgatgacgttaagggttttgtttccgctgtcgataac
gaacatcaaccatactcatcagaaggagagtctcacttttcttttgatactgcacaagat
atgttaacccactttttggaaatgggttgtcatagtgaacatggatatttactcttgcaa
tctatcttgcagtgtttggctcgaaaaatgaagagccattgtgctcatcatcttatttgg
cttttggaagctgaagcaagtcgaaggggccgtgacgtgagtcggtacacaacgtatctc
tgtggtgcccgagattatcctgatagtatggatgcgatgcgtatcatccttaaagaacag
gatttaattccggatgcagttttgctgcttgaggaagcatataaaggagatgcctcccca
ccagtagctttgttacgacaacccattttcattgcacttctagcagatgcattatttgca
agttctgatagattgttaactgaacaattagagcaatatgcatacctttacagctatgct
gcagtggtcgttgaagagattgaacctactactgaaagacgtatctcatgtatacgtact
gaagttgatgaagcaaaacgtgaagttttagaagcaagtcgaatttgtagacaatggaac
aatatgtctggcagtggaattagtttacgtgctttccgagaccttccatcgcttttgaga
tgtttatcatgtcgacctgtttcacttggtgtatttcgtttcgttcgggtcgtttttcat
acgaaacgtgtcgattttgaattaaatatggacaccatgaaaccttactgtatagtagtg
aatgaattggctgaggtcaatgaatatttacgtccagctctcttagcatttatcacagaa
ttactggcttcttcagttgaaggaatggaagacttgagtcagttagaatacaaacgaatg
ttggtcggattacttgttcatttactatcatgtggccatgtacttcctgtaataaacaca
atgcatagactgtttttacgcaatcgtgttgatgtttctattgttcgccattttgttaca
gaagttctaaaagtggcgggacaaccttatgcaacgttcttcatgaatgcattacatcct
ctggttgtccatccagatatcagtgatggtttgaaagggggaaaagacacagattacgtg
aatgaattcctcgagtattatgaaaaagaaaactcgccatcgccaagttattaa
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