Schistosoma haematobium (urinary blood fluke): MS3_00003650
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Entry
MS3_00003650 CDS
T05004
Symbol
PRPF38A_1
Name
(RefSeq) Pre-mRNA-splicing factor 38A, variant 2
KO
K12849
pre-mRNA-splicing factor 38A
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00003650 (PRPF38A_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shx03041
]
MS3_00003650 (PRPF38A_1)
Spliceosome [BR:
shx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
MS3_00003650 (PRPF38A_1)
Complex C
U4/U6.U5 tri-SnRNP related factors
MS3_00003650 (PRPF38A_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
24590552
NCBI-ProteinID:
XP_051071564
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All DBs
Position
ZW:complement(44102218..44115299)
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AA seq
302 aa
AA seq
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MANRTVKDAHTVHGTNPQYLLEKIVRSRIYESKFWKEHCFALTAELLVDKAVELRYVGGV
YSGSVKPTPFLCLTLKMLQIQPDKDIVIEFIKQEPYKYARALGAFYLRLVGDSVEIYKYL
ETLYNDFRRLKFQDKMGNFSLIYMDDFIDQLLTEERVCDVILPRLQKREVLEELNGLEPR
QSLLNEDLEDLQYVEELDTLNHVEESYKSKDKEKHRRRDYGKDHHHRRRHREESPHAERR
ERDRDHISSRHKDREENERKHDRERAHRRSHSGDRRNGRSKRNDSRSPDHKRTRDKDRDR
RH
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcgcacagtcaaagatgcacatacagttcatgggacaaaccctcagtatctt
ttggaaaaaatcgttcgaagtcgaatttatgagtcaaaattctggaaagagcattgcttt
gctcttacagctgaattacttgtcgataaagctgtggaacttcgttatgttggtggtgtg
tatagtggaagtgttaaaccaaccccttttctatgtcttacattaaaaatgcttcaaatt
cagccggacaaagatattgttatcgaatttatcaaacaggaaccatacaaatacgctcgt
gctttaggagcattttatcttagactagttggtgattctgttgaaatatacaaatatctt
gaaacgttatataacgattttcgacgtctcaagtttcaagataaaatgggaaatttcagt
ttaatatacatggatgactttattgatcaacttcttactgaagaacgtgtctgtgatgtt
attttacctcgtttacaaaaacgtgaagttcttgaggagctaaatggtttagaaccacga
caatcacttctgaatgaggatttagaagatttacaatatgttgaggagctggataccttg
aatcatgttgaagagagttataagtctaaggataaagaaaaacataggagacgagattat
ggaaaagaccaccatcatcgacgtagacatcgtgaagagtctcctcatgctgaacgcaga
gaaagagatagagaccatatatcatcaagacataaagatcgtgaagagaatgaacgcaaa
catgatcgtgagagagctcatagacgtagtcattctggagatcgtcgaaatggtcgatcc
aaacgtaatgatagtcgttcaccagatcataaacgtacccgagataaagatcgtgacaga
cgacattaa
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