Schistosoma haematobium (urinary blood fluke): MS3_00003682
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Entry
MS3_00003682 CDS
T05004
Symbol
USP39_1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MS3_00003682 (USP39_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shx03041
]
MS3_00003682 (USP39_1)
Spliceosome [BR:
shx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
MS3_00003682 (USP39_1)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
75577134
NCBI-ProteinID:
XP_051071610
UniProt:
A0A922LQ69
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Position
ZW:45368224..45375008
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AA seq
577 aa
AA seq
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MSSLSFVPHTVSSVSGHKRKHEKTRKKSSKRIKRSEGSDEEQVYTGNGAVYNDQNEDTRS
RSCPYLDTIRRNMLDFDFEKLCSVSLSHLNVYACLICGKYFQGRGNSTHAYTHSVSESHH
VFLNLETRRFYCLPDDYEILDGSLEDITYLLNPTFSTPEILALDSYSKMVRAYNGLTYYP
GVVGLNNIKANDYCNVILQMLSHISPLRNYFLDIKKFENLPSVSGDQMMLLVQRFSELIR
KLWNPRNFKTHVSPHEFLQAVVLCSKKRFQITEQGDAIEFLSWLVNAIDKALRIKKIPCP
RGAVNKTYKSIVSSTLRGKMRMYSRKIMPVNMTDEEKASLADSPEYMTSISDINFFYLTC
DLPPPPLYLDEFKENIIPQVSLATLLSKFNGVTEKEYKTHRDSTLRRFELRRLPPYLILY
MKRFVKNIFTLEKNPTIVNFPIRSIDFGELLAPEFRAKHRHTTYDLIANIVHDGPPTPGS
GTHRIHLVHRGTGKWFELQDLHVSEVLPQMIPLSETLIQVWAVNKSIPNPSFVEPVKVID
EEIGEETKPEVKTDENEECGEIKKEDTIDTVNNKPQN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcactgtcgtttgtacctcacactgtttcttcagtttctggacacaaaaggaag
catgaaaaaacccgtaaaaaatcctcaaaaaggatcaagcgtagtgaagggtcagatgaa
gagcaagtgtatactgggaatggagccgtttacaatgatcagaatgaagacaccagaagt
cgatcatgcccatacctggatactattaggaggaacatgctggattttgactttgagaag
ctgtgttccgtttctttatctcacctgaatgtctacgcctgtctaatctgtggaaagtac
tttcagggtcgtggaaattctactcatgcatatacccacagtgttagtgaaagccaccac
gtcttcctgaatttggaaactcgacggttttattgcttgcccgatgattatgaaatttta
gatgggtcattggaagacattacctacctactaaaccctactttcagtactcccgaaata
cttgctttggatagttattcgaaaatggtcagagcatacaatggtcttacatattatcct
ggtgttgtgggtctcaataatatcaaggctaatgattattgcaacgtcatattacaaatg
ctcagtcatatcagtccattgcgaaattatttcttagatatcaaaaaatttgagaaccta
ccttctgtctctggagatcaaatgatgcttttggtccaaagatttagtgaacttattcga
aaattgtggaatcctcgaaacttcaaaacccacgtttcacctcatgaattcttacaggca
gttgtgctgtgcagtaaaaagcgtttccaaatcactgaacaaggcgatgccattgaattc
ctttcatggttggttaatgcaatagataaagctttaaggattaaaaaaattccctgtccc
agaggcgcagttaataaaacctataaaagcattgtttcatcaactttacgaggaaagatg
agaatgtacagtcggaaaatcatgcctgtaaatatgacggatgaagaaaaggcttctctg
gcagacagccctgaatacatgacttcaatatcagacataaatttcttctatcttacgtgt
gacttacccccacctccactatatctagatgaatttaaggaaaacatcattccacaagtt
tcattagctacactactttcgaaatttaacggagttacagaaaaggaatacaagactcat
cgtgattctacgttgcgtcgatttgagcttcgtcgactacctccttacttaattctttac
atgaagaggtttgttaaaaacatctttacattggagaagaatccaacgatagttaacttc
cccattagaagtattgatttcggtgaattgttggccccagaatttcgagctaaacatcgg
catactacttacgacttgatagccaatattgtgcatgatggtcccccaactcctggctcc
ggtacgcatcgtatccacttagtacatcgtggtactggaaaatggttcgagctacaagac
ttgcatgttagcgaagtcttgccacagatgataccgcttagtgaaactcttattcaggtt
tgggctgtgaataagtctatacctaatccaagctttgtagagcctgtaaaagtaatagat
gaggagattggtgaagaaactaagccagaggttaaaactgatgaaaacgaggagtgtgga
gaaattaagaaggaagatactatagatacagtcaataataaaccacaaaactga
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