Schistosoma haematobium (urinary blood fluke): MS3_00003873
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Entry
MS3_00003873 CDS
T05004
Name
(RefSeq) hypothetical protein
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MS3_00003873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00003873
Enzymes [BR:
shx01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
MS3_00003873
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
MS3_00003873
3'-5' decay
Other 3'-5' decay factors
MS3_00003873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
DcpS
DUF5043
NFACT-C
Motif
Other DBs
NCBI-GeneID:
24593171
NCBI-ProteinID:
XP_051071838
UniProt:
A0A922LR39
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All DBs
Position
ZW:complement(53391530..53396390)
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AA seq
389 aa
AA seq
DB search
MSENSFRIGDTPVPPKKRARLDVSTVDTVNGSTDATSFRPENMHLISVLQNDLRNKCLVL
HTRFGDDPKEAIVTLQKSSFPNDPNTLKRCKVVNKLIGLHISDDIDDQCHKKDKTDETEN
DTFPQWQAKSIMKNDIYHRFLITNGLESINGIEMTVTYPAESHHFSRYANSPRHIIQETP
VLYKDVILPFLSQKPKDLTWIDNVVAGIAEQDRTLHNDADEMFGFTLVLDYRWDGLRIQE
LHCLGIAHDQKLTCLRDLRSCHVPMLKRILQLGRDTLFHKYSKSETSDNQMSGDNPKIIL
SKDQILAYIHYPPTFYRFHIHFVHIDSGDNYGTNACRAHILEEVIRNLEQDDLYYANRTI
TMFLHANNPIFAAICQNSSHISIVGSAPD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaattcgttccggattggtgacacacctgtgccgcctaaaaaacgtgcccga
ctggatgtatcaacggttgacactgttaacggttcgacggatgctacctcttttcgtcct
gagaatatgcatttaatatctgttcttcaaaacgatcttcgaaataagtgtttagtgtta
catactcgttttggcgatgatccaaaggaagctattgttacacttcagaaatcatcattc
ccaaatgatccaaacactttaaaacgttgtaaagtagttaataagctcattggtctccat
atttccgacgatattgatgaccaatgccataaaaaagataaaactgacgagactgaaaat
gatacttttccccaatggcaagccaagtccattatgaagaacgatatttatcatcgcttc
cttataacaaatggtctagagtccattaatggtattgaaatgactgtgacgtatcctgca
gaatcacatcactttagtagatatgccaactcccctcgtcatattattcaggagactcct
gtgttgtataaggatgtcattctcccttttttgtcccagaaacccaaggatcttacttgg
attgataatgtagtagcaggaatcgctgaacaagatcgtactcttcacaatgatgctgat
gaaatgtttggttttactttagtattagattaccgatgggatgggttacgcatccaagaa
cttcattgtttgggtattgctcacgaccaaaagctaacttgtctacgggatctccgtagc
tgccatgttccaatgctaaaaaggattttgcagctgggtcgtgatacactctttcacaaa
tattctaaatcagaaacatccgataatcaaatgtccggtgataatccgaaaattatttta
tcaaaagaccagattcttgcttatatacattatccaccgaccttttatagatttcatatt
cactttgtgcacatagattctggagacaactatggcactaatgcatgtagagcacatata
ctcgaagaagttattcgaaatctcgaacaagatgatctgtactatgcaaatcgtacaata
actatgtttctgcatgctaataatcccatatttgcagctatttgtcagaacagttcccat
atatctattgtcggttcagctcctgattaa
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