Schistosoma haematobium (urinary blood fluke): MS3_00003974
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Entry
MS3_00003974 CDS
T05004
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MS3_00003974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00003974
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MS3_00003974
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
DUF8272
Motif
Other DBs
NCBI-GeneID:
75577173
NCBI-ProteinID:
XP_051071964
UniProt:
A0A095CCD3
LinkDB
All DBs
Position
ZW:57083422..57088403
Genome browser
AA seq
311 aa
AA seq
DB search
MGDLNLLKPYAVFEQLFEQKIRIEDRDCLEFADINVAAGVLTSCHGSALVKVGKTQVIAG
VKVKVIPESGNSGNITCNVEFAGLCHRGSRLNAPQPKYAQWLSSTIQRLLNNFAFPSIEN
QLNIFSINDPDTLTPVASYTLKLDVFILHDDGCLLDACVPAALVSLCTTKWTKLYAVTDE
QAAGSYLELYKPGPRNETKSLKMNEWPVSLSFCFVPRPVADRKSKTVPIIAQPTKRELDI
WDTDAGPVHITVSQGAVVDLSVVSAFLTGLWDSLFVTSANESDVVNSWGVLFDSAVSHAQ
KVLQIIQKAVN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcttaaccttctaaaaccatatgccgtttttgaacaactatttgagcagaag
attagaatagaagacagggattgtctcgagtttgctgatataaacgtcgctgctggtgtc
ttaacctcctgtcatggttcagctcttgtcaaggtcggaaaaacgcaggtgattgcaggt
gtaaaggtcaaggtaattccagaaagcggaaactcaggcaacataacctgcaatgtcgag
tttgctggtctctgtcatagaggttcacgtttaaatgctccacaacctaagtatgctcag
tggctgtcttctacaatccaaagactcctgaataattttgcattcccatctattgaaaac
cagctaaacatattctcaataaatgacccagacacacttacaccggtagcttcctacact
ttgaagctcgatgtcttcatccttcatgacgatgggtgcttactagatgcttgtgtcccc
gctgcacttgttagtctttgtacaacaaagtggacaaagttatacgcggttacggatgaa
caagctgcgggatcctatttagaattatataaaccaggaccacgaaatgagacaaaatcc
ctaaaaatgaatgaatggcctgtttcactgtctttctgcttcgttcctcgcccggttgct
gatagaaagtcaaagacagtccctattattgcccaaccaacgaaacgagagttagatatt
tgggatactgatgctggtccagtacacataactgtttctcagggtgctgtcgtcgatctt
tctgtggtcagtgcatttttaacgggtctttgggacagtttatttgtaacgagtgcaaat
gaaagtgatgtagtcaactcatggggagttttgtttgattctgccgtttctcacgctcag
aaagttctacagataatccaaaaagcagtaaactag
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