Schistosoma haematobium (urinary blood fluke): MS3_00004110
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Entry
MS3_00004110 CDS
T05004
Symbol
RAE1_1
Name
(RefSeq) Poly(A)+ RNA export protein rae1, variant 3
KO
K14298
mRNA export factor
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MS3_00004110 (RAE1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00004110 (RAE1_1)
03036 Chromosome and associated proteins [BR:
shx03036
]
MS3_00004110 (RAE1_1)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MS3_00004110 (RAE1_1)
Chromosome and associated proteins [BR:
shx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
MS3_00004110 (RAE1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_RSE1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Peptidase_M10_C
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
WDCP
Motif
Other DBs
NCBI-GeneID:
24592764
NCBI-ProteinID:
XP_012796743
UniProt:
A0A095ARI2
LinkDB
All DBs
Position
ZW:63110919..63118971
Genome browser
AA seq
365 aa
AA seq
DB search
MTLFNSGTQNVFNSVSIGSNKTMSSAQKTAEVQSPPGDTVSCLRFSPESMQTTFLAATSW
DNRIRIWEVQANGSTIPKAEQMHQGPVFGACWSTDGSKIFSVSADKTAQMWDLGSNTFAQ
VGVHDAPVKTAHFITAPNYSCLMTGSWDKRLRFWDTRQPQPILNLDLPERIYCADVHYPL
ALVGTAGRQIFVYNLENGPTQFNQLESPLKFQSRCISIFMDKQKQNPSGFALGSIEGRVA
IQYLNPTTPKDNFTFKCHRSNAPVNGYHEIFAVNDMAFHPVHGTLATVGSDGCYSFWDKD
ARTKLHSSDSPDQPLTCCVFDPKGQVFCYASGYDWSKGYQFADPSKPIKIMMRLCMEEMT
PGRKS
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgacactctttaatagtgggacacaaaatgtctttaattcagttagtattggttcaaat
aaaactatgagttctgcacaaaaaacagccgaagtccagtctcctccaggagatacagta
tcgtgtcttcgcttcagtcctgagtccatgcaaacaaccttcttggctgctactagttgg
gataatcgtattagaatttgggaagtccaagccaatggttctaccattcccaaggctgag
cagatgcatcaagggcctgtatttggggcttgttggagcactgatggttcgaaaattttc
agtgtatcagcagacaaaactgcgcaaatgtgggatcttggttcaaacactttcgcgcaa
gttggtgtacatgatgctcccgttaaaactgctcattttattaccgctccaaattattct
tgtttgatgacaggttcatgggataaacgacttagattctgggatacaagacaacctcag
cctatcttaaacttggatttgccggaaaggatctattgtgctgacgtccattatccactt
gcccttgtcgggactgcaggtcggcaaatatttgtgtataatttagaaaatggtcctact
caattcaaccaattagagtctcctcttaaatttcagagtcgttgtatatctatattcatg
gacaaacaaaaacaaaatcctagtggctttgctctagggagcattgaagggcgtgtcgct
atacagtatttaaatccaactacgcctaaagataatttcacttttaaatgtcatcgttcc
aatgcaccggtcaacggttaccatgaaatttttgcagtaaatgatatggctttccatccg
gtgcatggcacactagccacagtggggtccgatggatgttattcgttttgggataaagac
gctagaactaaattacattcttcggattctccagatcaaccgctcacctgctgtgtattt
gatcctaaaggccaagtgttctgttatgcatcaggttatgactggtctaaaggatatcag
ttcgccgatccatctaaacccatcaaaataatgatgcgcttatgtatggaagaaatgact
cctggtagaaaatcataa
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