KEGG   Schistosoma haematobium (urinary blood fluke): MS3_00004384
Entry
MS3_00004384      CDS       T05004                                 
Symbol
WDR82_1
Name
(RefSeq) WD repeat-containing protein 82, variant 2
  KO
K14962  COMPASS component SWD2
Organism
shx  Schistosoma haematobium (urinary blood fluke)
Pathway
shx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:shx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    MS3_00004384 (WDR82_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shx03019]
    MS3_00004384 (WDR82_1)
   03036 Chromosome and associated proteins [BR:shx03036]
    MS3_00004384 (WDR82_1)
Messenger RNA biogenesis [BR:shx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     MS3_00004384 (WDR82_1)
Chromosome and associated proteins [BR:shx03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     MS3_00004384 (WDR82_1)
    COMPASS/SET1 complex (yeast)
     MS3_00004384 (WDR82_1)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_EML WD_LRWD1 NBCH_WD40 WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_HPS5 Beta-prop_DCAF4 MIOS_WD40
Other DBs
NCBI-GeneID: 24593859
NCBI-ProteinID: XP_035587869
UniProt: A0A6A5DLP5
LinkDB
Position
ZW:complement(75047441..75055086)
AA seq 320 aa
MKLTDSTIRTFKPVKYFKENSDRINSLSYSSNGETLISSSDDDQMVTYDCSSGTPKRTLN
SKKYGVNLIQFTHSPTTAIHASTKIDDTIRYLSLHDNKYIRYFQSHTKRVVSLCMSPIDD
TFLSGSMDSTIRLWDLRSPNCHGVMHVSGRPTAAFDPEGLIFAAGINSESVKLYDLRSFD
KGPFATFKLGMETSGCIWTGLQFSSDGKALLITTNGTHIRLVDAFKGSHLHTLAVIPNTD
RQTLHASFTPDSQFVLIGSPDGVVHIWSVETGVRVASLPGYEAATQLPNAAIHSLAFNPR
FAMLATGSNQTSFWLPALEE
NT seq 963 nt   +upstreamnt  +downstreamnt
atgaagctgactgattctactatcagaacttttaaacctgtgaaatattttaaggagaat
tcagaccgtatcaattccctcagttattccagtaatggtgagacgcttatttctagcagt
gatgatgatcagatggtgacttacgattgttctagcggaacacctaaacgtacacttaac
agcaaaaaatatggagtaaacttgatacaattcactcacagtccgacgactgcaattcac
gcttcaacaaagattgatgatacaatacgttacctttctttgcatgataacaagtacatc
aggtacttccagagtcacactaaaagggtcgtttcgttgtgtatgtcacctattgatgac
acgttcctgtctggttcaatggatagtactattcgtttgtgggatttgaggtcacctaac
tgccatggtgtaatgcatgtttctggtcgaccaacagcggcttttgatccagaaggatta
atatttgcagcggggattaattccgaatctgttaagctctatgacctacgatcattcgat
aagggaccgtttgctacgttcaaattgggcatggaaacaagtggatgcatttggaccggt
ttacaattttcctctgatggaaaggctcttttaataacgaccaacggaactcatattcgt
ctagttgacgcatttaagggatcccatctgcatacattagccgttataccaaatactgat
agacaaacgctacatgccagtttcacaccagatagtcagtttgttttaattggttcgcca
gacggagttgtacatatttggtctgttgaaactggagtacgtgtggcaagcctaccaggt
tatgaagctgctacccagttaccaaacgctgctattcatagtctcgcttttaatccccgg
ttcgcaatgctagctacaggatctaaccaaacgtcgttctggcttccagctcttgaagag
taa

DBGET integrated database retrieval system