Schistosoma haematobium (urinary blood fluke): MS3_00004812
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Entry
MS3_00004812 CDS
T05004
Symbol
YBX1_1
Name
(RefSeq) Y box binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shx03000
]
MS3_00004812 (YBX1_1)
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00004812 (YBX1_1)
03041 Spliceosome [BR:
shx03041
]
MS3_00004812 (YBX1_1)
Transcription factors [BR:
shx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
MS3_00004812 (YBX1_1)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
MS3_00004812 (YBX1_1)
mRNA cycle factors
Common to processing body (P body) and stress granule
MS3_00004812 (YBX1_1)
Spliceosome [BR:
shx03041
]
Common components
Common spliceosomal components
General mRNP proteins
MS3_00004812 (YBX1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
S1
Motif
Other DBs
NCBI-GeneID:
24589516
NCBI-ProteinID:
XP_035586150
UniProt:
A0A922LUI3
LinkDB
All DBs
Position
1:21365454..21368737
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AA seq
217 aa
AA seq
DB search
MADTRPAEKDEQQKQNTPRKVMEERVKGVVKWFNVKAGYGFINRQDTSTDIFVHQSAISR
NNPEKLQRSLQEGEEVEFYVVEGDKGDEASEVTGPGGEPVKGSVYAALRGRGRSPRVFNM
RGRGRGMGPGGFSSNQDFVPYYGPRGRGRGRGGSEMYGGGYEFMDRGGRGRGFRGRGRPR
GRGFRGSGGFESRGRSGPRGGRDNYHNEDGSPDMRDA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcagacactagaccagctgaaaaagatgaacagcagaaacaaaacacgccacgcaag
gtgatggaagagcgtgtcaaaggcgtggttaagtggttcaatgtgaaggctggatatggc
ttcatcaaccgtcaggacacatccacggacatatttgtgcaccaatcggcgatttcacgt
aacaatccagaaaagcttcagcgttcactccaggagggggaagaggtggagttttatgtt
gttgagggagacaagggcgacgaagcatccgaagtgacaggccctgggggtgaacctgtt
aaaggcagtgtgtacgcagctttgcgtggacgtggacgcagcccacgagtgtttaacatg
cgtgggagaggtcgtgggatgggacctggtggattctctagcaatcaagactttgtgcct
tactacggtcctcggggtcgaggccgcggccgtggtggctcagaaatgtatggaggtggt
tacgaatttatggatcgtggtgggagaggccgcgggttccgtggacgtggaagacctcgt
ggtcgtgggtttaggggatccggtgggttcgaatctcggggtcgcagtggtcctcgtgga
ggaagagataattatcataacgaggatggctcaccggatatgcgagacgcttaa
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