Schistosoma haematobium (urinary blood fluke): MS3_00004858
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Entry
MS3_00004858 CDS
T05004
Name
(RefSeq) hypothetical protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MS3_00004858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shx03000
]
MS3_00004858
03021 Transcription machinery [BR:
shx03021
]
MS3_00004858
Transcription factors [BR:
shx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MS3_00004858
Transcription machinery [BR:
shx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MS3_00004858
RNA polymerase III system
TFIIIB
MS3_00004858
RNA polymerase I system
SL1/TIF-1B
MS3_00004858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
24590324
NCBI-ProteinID:
XP_051068749
UniProt:
A0A095BZ37
LinkDB
All DBs
Position
3:4622175..4636428
Genome browser
AA seq
271 aa
AA seq
DB search
MNPLSQQHSVASIGSLLGNLPLQGDSSLQQKTPLISGGSVNLNLHASDNAASIPGRTPCT
PLTLSTPLQDRDGAIPVPQLQNIVCTVYLGCKLNLKNIALSARNAEYNPKRFAAVIMRIR
EPRTTALIFSSGKMVCTGAKSEEQARLAARKYARIIQRLGFEAHFKEFKIQNMVGSCDVR
FHIRLEGLVLSQGQFATYEPELFPGLIYRMTKPKIVLLVFVSGKIVLTGAKVREEIYEAF
NNIYPILKNFKKSDKDPRALTSSSNYMHPLT
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccttatcacagcaacatagtgtagctagtattggaagcttgttgggcaacttg
cctttacaaggagattcaagcttacaacaaaaaactccacttatttctgggggttcagtc
aatcttaacttacatgcgtctgacaatgccgccagtattccaggcagaacaccttgtact
ccgctcactttatctactccgttgcaagaccgagatggtgcaatcccggtaccccaatta
cagaatattgtatgtaccgtatatttaggatgtaaattaaatttgaagaatatagcactt
agtgctcgaaatgctgaatataatccaaaacgttttgctgcagttataatgcgtatacgt
gaacctcgaacaactgctttgattttttcttctggtaaaatggtgtgtacaggtgcaaaa
agtgaagagcaagcaagactagctgcaagaaaatatgctcgtattattcaaaggcttgga
tttgaagctcatttcaaagagttcaaaattcaaaatatggttggttcatgtgatgtccgc
tttcatatacgtcttgaaggtttagtattgtcacaaggtcaatttgcaacatatgagcca
gaattattccctgggttaatttatcgtatgactaaaccaaagatagtcttattagtcttt
gtttctgggaagattgttttaacaggagcaaaggttcgtgaagaaatttatgaagctttt
aataacatttatccaattttgaaaaattttaaaaaatctgacaaagatcctagagctctc
acatcatcatcaaattatatgcacccattaacttga
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