Schistosoma haematobium (urinary blood fluke): MS3_00004901
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Entry
MS3_00004901 CDS
T05004
Name
(RefSeq) hypothetical protein
KO
K13114
pinin
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03013
Nucleocytoplasmic transport
shx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MS3_00004901
03015 mRNA surveillance pathway
MS3_00004901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00004901
03041 Spliceosome [BR:
shx03041
]
MS3_00004901
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MS3_00004901
Spliceosome [BR:
shx03041
]
Complex C
Other components
EJC/TREX
MS3_00004901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
BAH
Motif
Other DBs
NCBI-GeneID:
24589507
NCBI-ProteinID:
XP_035586144
UniProt:
A0A6A5D110
LinkDB
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Position
1:21521694..21539992
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AA seq
437 aa
AA seq
DB search
MESIDVLKKNLELAKEQLKIVDNDIKRITGRDPSDRRIGEANSKRIRARIAGVNQLRPDS
SDKVNDDKILQDIKRPIDDDLRVSVASSVVRVTDTRSREDAAKELKKSDKERGRRMLGIL
QGTLKQFQAESAAAIKKPQMEKRRLVDAKLEARAKEEKENLRRERAELFRTRREHHVEVS
ILQQKMRLLKKFEIWKEQQEKMKGFCRTSKPPYIFYRPKIHNEESKWRIEVTVRAIDALI
ARRRKKLETEFEENLQARRRMASINSDPSDNKVNKTEDSDKKNYDRDEHGKSDERWSSLN
DISSEAKFNSSTISTNQHRGPSYTSPRSSNTFTSKNFHNSHRQELEAGELSDGSETFALG
DEPQLMEEDQHHSMYTESPNRAKKQNTSPLLSSKRSSSHLSSHSSPVRCQPLTQKRKLSS
VGESHPSDNVIKEKETN
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaatctattgatgtcttgaagaagaacttggaacttgctaaagagcagttaaaaata
gttgacaatgatataaaaagaattacaggacgagacccatctgatagacgtataggagaa
gcgaattccaagcgtatacgtgcgcggatagctggagtcaaccaattaaggccagattct
tcggataaagtaaatgatgacaaaatccttcaggatattaagcgacctattgatgatgat
ttacgagtttctgttgcatcctctgttgttcgtgttactgatactcgttctagggaagat
gcagccaaagaattaaaaaagtcagacaaagaaagaggacgccgtatgcttgggattctt
cagggtacattgaagcagttccaagctgaatctgcagctgcaatcaaaaaacctcaaatg
gaaaaacgacgtttagttgatgctaagttggaagctcgagcaaaagaagaaaaagaaaac
ttacgtcgtgaacgcgcagaactatttcgtactcgacgagaacatcacgttgaagttagc
attctacaacaaaaaatgagattattgaaaaagtttgagatatggaaggagcaacaggaa
aaaatgaaaggtttttgtcgtacttcaaaaccaccatatatattttatcgcccgaaaatc
cacaatgaagagtcaaaatggcgtatagaagtaacggttcgcgctatagacgctctcatt
gctcggcgtcggaaaaagctcgaaacagaatttgaagaaaatttacaagcgcggcgtcgt
atggcttcaattaatagtgatccatcggataataaagtaaacaaaactgaggattctgac
aagaagaattatgatagggatgaacatggaaaaagcgatgagcgatggtcttcattaaat
gatatttccagcgaagctaagtttaacagttctacgatttctacaaatcaacatcgtggt
cccagttacacttcaccgcgttcatcgaatacttttacgagcaaaaacttccataattct
catcgtcaagaattagaagctggtgaactatcggatggtagcgagacattcgctttagga
gatgaacctcaactaatggaggaagaccagcatcattctatgtatacagaatctccaaat
cgtgcaaaaaaacaaaacacatctcctttattatcatctaaacgatccagtagtcatcta
tcatcacacagtagcccagtacgttgtcaacctctgactcaaaaacgtaagttatcctct
gttggtgaatctcatccatctgataatgtgattaaagaaaaagaaacaaactag
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