Schistosoma haematobium (urinary blood fluke): MS3_00004984
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Entry
MS3_00004984 CDS
T05004
Symbol
RPA1
Name
(RefSeq) 60S acidic ribosomal protein P1
KO
K07466
replication factor A1
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03030
DNA replication
shx03420
Nucleotide excision repair
shx03430
Mismatch repair
shx03440
Homologous recombination
shx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MS3_00004984 (RPA1)
03420 Nucleotide excision repair
MS3_00004984 (RPA1)
03430 Mismatch repair
MS3_00004984 (RPA1)
03440 Homologous recombination
MS3_00004984 (RPA1)
03460 Fanconi anemia pathway
MS3_00004984 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shx03000
]
MS3_00004984 (RPA1)
03032 DNA replication proteins [BR:
shx03032
]
MS3_00004984 (RPA1)
03400 DNA repair and recombination proteins [BR:
shx03400
]
MS3_00004984 (RPA1)
Transcription factors [BR:
shx03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
MS3_00004984 (RPA1)
DNA replication proteins [BR:
shx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
MS3_00004984 (RPA1)
DNA repair and recombination proteins [BR:
shx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
MS3_00004984 (RPA1)
MMR (mismatch excision repair)
MS3_00004984 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
MS3_00004984 (RPA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
DUF223
POT1
Motif
Other DBs
NCBI-GeneID:
24588470
NCBI-ProteinID:
XP_051068916
UniProt:
A0A922ITG5
LinkDB
All DBs
Position
3:complement(10478062..10493636)
Genome browser
AA seq
555 aa
AA seq
DB search
MLATQLNHLIDENKLVNNTVIRVRKHVCNNIQNNKVVLIVLDLDILGTDDSSGGLKSEQP
PTVAKPATITSHSVEPEQKTPPKSSGPFSGGQPSTPGTPGCGLPRVFPIQSLNPYQNRWT
IRARVSQKSAIRTWSKQGRDGKLFNFTLVDESGEIRVTGFNAEVDKFYDMIEVNKVYYVS
RANLKAANKQFNTTNNDYEMTLHSDSQVLPCEDSDTSSLPETHFNFISIGKLDTQSPGSF
VDIVGVVHECGEAQTITAKASQRELRKRELGLVDSSNCLVRLTLWGEEAENFDGASHPVI
VIKAAKISDFNGRSLSVSPTSSLLISPTNIPEAIRLKGWYEHEGRYSNFETFRSEMVGSS
GGADGVSSSSGVLGGWNLLQDVKASGVGANVKADYFTCKATVVFMKKENFMYQACSTEGC
NKKVIDLGNGLYRCEKCARETPDCKWRLLLMAKIADVTGDLWVTCFQDAAEALLGQTAEK
LGTIKSTQDETQLEKVFIESAFNSWIFRLRAKVDRYNDEERLRVVVADVKPVDLIDYSRR
LLKAINDLSATLSIQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccacacagttaaaccatttgattgatgaaaacaaactggtcaacaatactgta
atccgcgttaggaaacatgtttgtaataacattcaaaataataaagttgtcctcattgtt
ttggatcttgatatacttgggacggatgattcgtcaggtggtttgaagtccgaacaacca
cccacggtagccaaaccagccacgatcacatctcattcagttgaacctgaacagaaaact
ccacccaaatcttctggtcctttctctggtggtcagccaagtactcctggaacaccaggt
tgtgggctcccacgtgtatttcccatacaaagcctcaatccgtatcagaatagatggact
atacgtgctcgtgtatcacagaaatcagctatccgaacttggagcaaacaaggtcgtgat
ggaaagttattcaactttacactagtcgatgaaagcggtgaaatccgtgtaactggattc
aatgctgaagtggataaattttatgacatgattgaggtcaataaagtgtactatgtcagt
cgagcaaacctgaaggccgctaataaacaattcaatacaactaataacgattacgaaatg
acacttcatagcgatagtcaagtgttgccttgtgaagattcagatactagttctttgcca
gaaactcacttcaattttatttcaataggaaaattagatacacaatctcctggatctttt
gttgatattgttggagttgtacatgaatgcggtgaagcacaaacaattactgccaaagca
tctcaacgtgaactacgtaaacgcgaattaggattagtggatagttctaactgtctagta
cgtcttacactatggggtgaagaagcggagaatttcgatggtgcaagtcatcctgtcata
gttataaaagcggcaaaaatatctgattttaatggtcgctctttatctgtaagcccaaca
tcatcccttcttattagtcctacaaatattcctgaagctatacgactaaaaggttggtat
gaacatgaaggtcgctactctaactttgaaaccttccgtagtgaaatggttggatcttca
ggaggggcagatggtgtatctagttcgtctggtgttcttggcggttggaatctcttgcaa
gatgtcaaagcatctggtgtgggagctaatgtaaaagcagattatttcacttgtaaagct
actgttgtattcatgaaaaaggagaatttcatgtatcaagcttgttctactgaaggatgt
aataagaaggtgattgatttaggtaatgggctatatcgatgtgaaaaatgtgctagggaa
acacctgattgtaaatggcgcttgcttcttatggccaaaattgctgacgtcactggagat
ttatgggttacatgttttcaagacgctgctgaagctttactgggacagacagctgaaaag
ttgggcactataaagtcaacacaagatgaaacacagttggaaaaagtgttcatcgagtca
gcatttaactcatggatatttcgtttacgagctaaagttgatcgttataatgatgaagaa
cgtttacgtgttgttgttgcagatgttaaaccggtagatttgattgattattctaggcgt
ttattgaaagccataaatgatctatcagcaactttatctattcagtaa
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