Schistosoma haematobium (urinary blood fluke): MS3_00005400
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Entry
MS3_00005400 CDS
T05004
Symbol
TOP3B_1
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03440
Homologous recombination
shx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MS3_00005400 (TOP3B_1)
03460 Fanconi anemia pathway
MS3_00005400 (TOP3B_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shx03032
]
MS3_00005400 (TOP3B_1)
03400 DNA repair and recombination proteins [BR:
shx03400
]
MS3_00005400 (TOP3B_1)
Enzymes [BR:
shx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MS3_00005400 (TOP3B_1)
DNA replication proteins [BR:
shx03032
]
Eukaryotic type
DNA Topoisomerases
MS3_00005400 (TOP3B_1)
DNA repair and recombination proteins [BR:
shx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
MS3_00005400 (TOP3B_1)
FA (Fanconi anemia) pathway
MS3_00005400 (TOP3B_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Motif
Other DBs
NCBI-GeneID:
24592109
NCBI-ProteinID:
XP_051069456
UniProt:
A0A922LK98
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All DBs
Position
3:complement(27073768..27097823)
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AA seq
684 aa
AA seq
DB search
MLGKNLIFESVVRSLGSKRNFFSFILFKGKYGDLNSNLVSFGPCQTPTLGFCVKRHDQIQ
SFKPETFWRIKVSGVDDTGGVLEMSWNRDRIFDKEAASVFLGRVKSSKTAEVVQVSVKHK
IKPRPQGLNTVEMLRVASAGLGIGPHSAMAIAERLYTSGYINYPRTETTAYPNTFDLRGL
LQQQVNNPVWGDLAREILKSGLTPPRAGHDAGDHPPIAPMRFASSQELGHEAYRLYEYIT
QHFIATIMPDCCYEQTQVTVSVGDGELFTISGLKVVDPGFTRILTWQAIEDKSLPITLLN
QGYQFNLLEEPSLVEGQTGPPDYLTEAELITAMERHGIGTDASIPTHIENIVQRGYVQLL
SGRKLQPTPLGIVLVHGYQTIDAELVLPHMRRAVEEQLNHIARGHAKYDLVLQFVLAIFA
AKYRYFVEHINGMDQLFEVSFTTLASSGKPLSRCGKCHRYLKFIDSRPQRLHCSICNETY
TLPQNGTIRPYKTEKCPLDKFELLCYTQGGKGRNMVFCPYCFSHPPFESMPKLSGCNRCP
HPTCPQSMESLGVDACPDCPYGILVLDDSNAPKYRLNCNRCPTFLSISDAVKSMSVKNVS
CSVCTAMHLNLRFDPGKVPNSSEDNSEKISTTFSGCAFCTESLCSLFTIVRKKEAPNNPT
VNLRGSRHHSGTHQRGGRRGRSFR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgctaggcaagaacttgatcttcgaatcggttgtgcgttcactaggttccaaacgaaat
tttttcagtttcattctgtttaaggggaagtatggtgatctaaacagcaatcttgtgtcg
tttggaccttgtcaaacacctacacttggattttgcgtaaaacgacacgatcaaatccaa
tcatttaaaccagaaacattttggcggataaaggtctcgggtgtagatgataccgggggt
gtattagaaatgtcatggaatcgtgatcgtatctttgataaagaagctgcttcagtattt
ttaggtcgagtcaagtcttccaaaacagcagaagtcgtccaggtatctgtcaaacataaa
attaaaccacgtccacaaggtttgaatacagtagaaatgttacgagttgccagtgctggt
ttaggtattggaccacatagtgcaatggctattgcggaacgattgtatacatctggttac
ataaactatccacgtactgagacaacagcttatccaaacacatttgatttacgtggatta
ctacagcagcaggtgaataatccagtttggggagatctagctcgtgaaattctaaaaagt
gggttaactccacctcgtgctggtcatgatgcaggtgaccatcctcctattgctcctatg
cgttttgcgtcttcccaagaactgggacatgaagcatatcgattgtatgagtacattaca
caacattttatcgctactattatgcccgattgttgttatgaacaaacacaagtgaccgta
tccgttggtgatggtgaattgtttacaataagtggattaaaagtagttgaccctggtttt
acacgaatattaacttggcaagcaatagaagataaatcgttgcctataacacttcttaat
caaggctatcaattcaatttacttgaagaaccaagtttagttgaaggacaaactggtcca
ccagactatttaactgaggctgaattaattacggctatggaacgtcatgggattggaact
gatgcatcaatcccaacacatatagaaaatatcgttcaaagaggttatgttcaacttctt
tcggggcgaaaactacaacctacaccattagggattgtacttgttcatggttatcaaaca
atcgatgccgaacttgtcctaccacatatgcgtagagctgttgaagaacaattaaatcat
attgctcgtggtcatgctaaatatgatttagtattacaatttgttttagctatttttgcc
gcaaaatatcgttattttgttgaacatatcaatggtatggatcaattgtttgaagtttca
ttcactactctagctagttcaggtaaacctttatccagatgtggaaaatgtcatcgatac
ttaaagtttatagattctcgaccacaacgacttcattgttcaatttgtaatgaaacatat
acattaccacagaatggtacaattcgaccctataaaaccgaaaagtgtcctttagataaa
tttgaactactatgctatactcagggcggtaaaggaagaaatatggttttttgtccatat
tgtttttctcatccaccatttgaatcaatgccaaaattatccggttgtaatagatgccct
catccaacatgtccacaatcaatggaatcattaggagttgatgcatgtcctgattgtcca
tatggtatactagttttagatgattctaatgcaccaaaatatcgtttaaattgtaataga
tgtccaacattcctgtctatttctgacgctgtaaaaagtatgtctgtcaaaaatgttagt
tgttcagtatgtacagctatgcatcttaacttgagatttgatccgggtaaagtccctaat
tcaagcgaagataattctgaaaaaattagcactacattctctggatgtgcattctgtaca
gaatcattatgttcattattcactattgtaagaaaaaaggaagcaccgaataatcctact
gtcaatttacgtggttcacgccatcattctggaacccatcaacgaggtggtcgacgaggg
cggagttttcgataa
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