Schistosoma haematobium (urinary blood fluke): MS3_00005819
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Entry
MS3_00005819 CDS
T05004
Symbol
POLR2J_1
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03020
RNA polymerase
shx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MS3_00005819 (POLR2J_1)
09124 Replication and repair
03420 Nucleotide excision repair
MS3_00005819 (POLR2J_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shx03021
]
MS3_00005819 (POLR2J_1)
03400 DNA repair and recombination proteins [BR:
shx03400
]
MS3_00005819 (POLR2J_1)
Transcription machinery [BR:
shx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
MS3_00005819 (POLR2J_1)
DNA repair and recombination proteins [BR:
shx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MS3_00005819 (POLR2J_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
24590242
NCBI-ProteinID:
XP_051069928
LinkDB
All DBs
Position
3:42376166..42399249
Genome browser
AA seq
110 aa
AA seq
DB search
MNAPASFEPFLLADGEKKISFEKDTQVPNAAIFTLNREDHTVGNMITCQLLKDPRVLFAG
YKAPHPLEHKIVIRVHTAHPATPVDVFVSALKDLISEISNIEEQFRMATK
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctcctgcttcgttcgaaccattcctgcttgccgatggtgagaagaagatctcc
ttcgaaaaggacactcaggttccaaatgctgccatttttaccctaaatcgagaggatcac
actgttggaaatatgataacatgccagttactaaaagatccaagagtattatttgcagga
tacaaagctcctcatccattggagcacaaaatcgtcattcgagtacatacagctcatccg
gcgacacctgtagatgttttcgtttctgctctgaaagatcttataagtgagatctcgaat
atagaagagcagttcagaatggcgacaaaatga
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