Schistosoma haematobium (urinary blood fluke): MS3_00006019
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Entry
MS3_00006019 CDS
T05004
Symbol
RFC5_1
Name
(RefSeq) Replication factor C (RF-C) subunit, variant 4
KO
K10756
replication factor C subunit 3/5
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03030
DNA replication
shx03410
Base excision repair
shx03420
Nucleotide excision repair
shx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MS3_00006019 (RFC5_1)
03410 Base excision repair
MS3_00006019 (RFC5_1)
03420 Nucleotide excision repair
MS3_00006019 (RFC5_1)
03430 Mismatch repair
MS3_00006019 (RFC5_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shx03032
]
MS3_00006019 (RFC5_1)
03036 Chromosome and associated proteins [BR:
shx03036
]
MS3_00006019 (RFC5_1)
03400 DNA repair and recombination proteins [BR:
shx03400
]
MS3_00006019 (RFC5_1)
DNA replication proteins [BR:
shx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MS3_00006019 (RFC5_1)
DNA Replication Termination Factors
ELG1-RFC complex
MS3_00006019 (RFC5_1)
Chromosome and associated proteins [BR:
shx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
MS3_00006019 (RFC5_1)
DNA repair and recombination proteins [BR:
shx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MS3_00006019 (RFC5_1)
Check point factors
HRAD17(Rad24)-RFC complex
MS3_00006019 (RFC5_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
ResIII
AAA_lid_RFC1
AAA_11
Rad17
AAA_5
AAA_14
RuvB_N
DEAD
nSTAND_NTPase5
AAA_16
AAA_30
AAA_assoc_2
AAA_7
DUF815
AAA_24
AAA_19
ATPase_2
nSTAND3
Mg_chelatase
AAA_18
bpMoxR
T2SSE
DNA_pol3_delta
AAA_28
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
24589050
NCBI-ProteinID:
XP_035587639
UniProt:
A0A6A5D828
LinkDB
All DBs
Position
2:<1941783..1952422
Genome browser
AA seq
326 aa
AA seq
DB search
IKLEFCFRIEKYRPSSIEDLISHDDISKTIKRFIDNDRLPHLLFYGPPGTGKTSTILAAA
KRLYSRQFASMVLELNASDDRGIDVVREQVLSFASTKTLFAGKFKLVILDEADSMTKDAQ
NALRRIIEKFTENTRFCLICNYLSKIIPAIQSRCTKFRFAPLPFNDVSVCLRKIASNEGV
DLTDDGVKAIYQFASGDMRKSINLLQSTSMSSKTVDGPSVYACVAYPSPAEVRSLLDHVL
NEPISTAYHNITTVKNLKGIALQDIITEIHPLIMRIDLPDAIRCDLLIALSDIENRMSQG
ASERLQLGAFVSAFTRAKIALESKIP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ataaaactggagttctgtttcaggattgagaagtacagaccgagctcgatagaagatctt
ataagtcatgacgacatatcaaaaactataaagagatttattgataatgacaggctaccg
catttactgttttatggtccaccgggaacgggaaaaactagcactatcctagctgccgca
aagcgtttgtactctcgtcagtttgcatccatggttttagagcttaatgcctccgatgat
cgggggattgatgttgttcgtgaacaagtactgagtttcgccagcacgaaaactctcttc
gctggaaaattcaagctggttattctagacgaagctgattccatgacaaaagacgctcaa
aatgcacttcgaagaattatcgaaaaatttacggaaaacacccggttttgtttaatttgt
aactacttgtcgaaaattatccctgcaatccaatcacggtgcaccaagttccgttttgca
ccactgcccttcaatgatgtcagtgtgtgtcttcgaaaaattgcatcaaatgaaggcgtc
gatttaactgacgatggagtaaaagcaatttatcagtttgcatctggggatatgcgtaaa
tctatcaacttattacagagtacatctatgtcttcaaaaactgtcgacggaccttctgtc
tatgcttgtgttgcatatccttcaccggctgaggttcgatcgctattggatcatgtactg
aatgaaccgatcagtactgcttatcacaatattacaacagtaaaaaatttgaaaggaatt
gcattgcaagatataattacagaaattcatccattgataatgcgtattgatttgccggat
gcaatacgctgtgatttattaattgcgttatccgatatagaaaatcgtatgtcacaagga
gcatcagaaagattacaattgggtgcatttgtttcagcatttactcgagcaaaaatagca
ctagagtccaagattccctaa
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