Schistosoma haematobium (urinary blood fluke): MS3_00006062
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Entry
MS3_00006062 CDS
T05004
Symbol
DDX56_1
Name
(RefSeq) putative ATP-dependent RNA helicase ddx56, variant 2
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shx03009
]
MS3_00006062 (DDX56_1)
Enzymes [BR:
shx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MS3_00006062 (DDX56_1)
Ribosome biogenesis [BR:
shx03009
]
Eukaryotic type
Pre-60S particles
Helicases
MS3_00006062 (DDX56_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
24590270
NCBI-ProteinID:
XP_012794160
UniProt:
A0A094ZK92
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All DBs
Position
2:4594178..4609987
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AA seq
580 aa
AA seq
DB search
MESVDEFHQLNLDQRILKAISDLNWIKPTDIQQVVIPLVFAKKCLIVHAKTGSGKTAAFA
IPILNDLLQEKQFALCQSTSVVVLAPTKELCSQVASNIKCLCKYAAKSISSVDISTGHDI
DQIKPLILENPDIIIGTPSRLMKVLRSGILSLKDLRCIVVDEADLIFTFGYEAEIRDLRS
YLPAKVQAILMSATLDDTSKVIRRYLVKNADWVRVELPDEAFLPGDSQLTQYIISAEDKD
KYAILIALFKLRIVRGKTLVFTNSVDRCYKLRLFLEEFGIRAALLNSELPVKSRSHVIDQ
FNRGLYDYLLATDESQADYSTSNNEGGKKSLKKSRCRDVEYGVSRGIDFQLVSNVINFDF
PPTPILYVHRVGRTARADQMGTALSFVSKLEESRLADVEALLNPAGAAAAVKSGVASEKK
DFASSIFRPYQFRLSEVDGFRYRAADVMRHITRKVVREARLKEIKLELLNSERLKGYFQD
HIPDLEALRHDKPLKHVAQPHLKDVPDYLVPQSLKALMPGSCHSRKATQRWKRRNLHTDD
KSNTSFVDLKKRLQIKHKQAKKRKSQNPLFSFGRKKSKVG
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgtagatgagtttcaccagctgaacctcgaccagagaatcttgaaggctatt
tctgatttgaactggataaaacctactgatatacagcaggtcgttataccgctggttttc
gccaaaaagtgtttgatagttcacgcgaaaacaggatctggaaagactgctgcatttgcg
attccgattctaaatgaccttttgcaggagaaacagtttgctttgtgccaatccacttca
gtcgttgttcttgctccaacaaaagagttatgttcgcaagttgccagtaatatcaaatgc
ctttgtaaatatgctgcgaagagtatttcatcggttgacatatcgactggtcatgacatt
gatcaaataaagcctctcatattagagaaccctgatataattatcggaacaccgtctaga
ctaatgaaagtcttacgttcaggcatcctatcactgaaggacctgcggtgcatcgtcgta
gacgaggctgaccttatatttacatttggttatgaagctgagatacgtgatctgagatct
tatcttcctgcgaaggttcaagccattttgatgtctgctactctggatgacacatctaaa
gtcataagacggtatttggtgaaaaatgctgactgggttcgtgtagagttacccgatgaa
gcttttttaccaggagacagccaactaacacaatatattatcagtgctgaagacaaggac
aaatatgccattttaattgctttattcaaattgaggatagttcgtggaaaaacactggtt
ttcactaactctgttgaccgatgttacaagctccgtttatttttggaagagtttggaatt
agagcagcactgttaaattcagagctaccagtcaagtcacgttctcatgttatcgatcag
tttaacagagggctatacgactatttattagcgacagatgagtcgcaagcagattatagt
acttcaaataatgaaggtggtaaaaagtcattaaaaaaatcacgatgtcgtgatgttgaa
tatggtgtatctagaggaatcgattttcaattggtcagtaatgtaatcaatttcgacttt
ccaccaacacctatcctttatgtacatcgcgtcggacggacagctcgagctgatcaaatg
ggaactgctctttcatttgtcagtaaattggaagaaagtcgtttagctgatgttgaagcg
ttactaaatccggctggtgcagctgctgcagtaaaatcaggtgtagccagtgagaaaaaa
gattttgcttcgtctatcttcagaccttatcagtttcgtctttctgaagtagatggtttc
agatatagagcagctgatgtgatgcgccatataactcgtaaagttgtaagagaagcacgt
ttgaaagaaatcaaacttgaactactcaattctgaacgtttgaaaggttactttcaagat
catatacccgatttagaggcgcttcgtcatgacaaaccactcaaacatgttgctcaacca
catctcaaagatgtaccagattatctagttcctcaatccttaaaagctcttatgccaggc
agctgtcatagtcgaaaagctacgcaaagatggaaaagaagaaatttacacactgatgat
aaatctaacacttcatttgtcgatcttaaaaagcgtttacaaattaaacataaacaagct
aaaaaacgtaaatctcaaaacccattattttcatttggacgaaaaaaatctaaagttggc
taa
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