Schistosoma haematobium (urinary blood fluke): MS3_00006083
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Entry
MS3_00006083 CDS
T05004
Symbol
RARS1_1
Name
(RefSeq) Arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MS3_00006083 (RARS1_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shx01007
]
MS3_00006083 (RARS1_1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shx03016
]
MS3_00006083 (RARS1_1)
03029 Mitochondrial biogenesis [BR:
shx03029
]
MS3_00006083 (RARS1_1)
Enzymes [BR:
shx01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
MS3_00006083 (RARS1_1)
Amino acid related enzymes [BR:
shx01007
]
Aminoacyl-tRNA synthetase
Class I (G)
MS3_00006083 (RARS1_1)
Transfer RNA biogenesis [BR:
shx03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MS3_00006083 (RARS1_1)
Prokaryotic type
Other AARSs
MS3_00006083 (RARS1_1)
Mitochondrial biogenesis [BR:
shx03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
MS3_00006083 (RARS1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
PFam54_60
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
24587893
NCBI-ProteinID:
XP_051073540
UniProt:
A0A922LVN4
LinkDB
All DBs
Position
1:complement(25645066..25659932)
Genome browser
AA seq
644 aa
AA seq
DB search
MASDYIQRKEVRCLQNEYDKLLQSANFSEIKKLLEEGEKLRYQASHLEKYLKQLENHVQH
NSISIQATVAALFDYAIKTVFINTKHCVQLNVPNKRSFGDYQCNSALSIRKESNSDQNPF
DIAKSIVAALPVNDLIERVDVVLPGFINIWIKQQFISTEVRKILLHGVTPPFIPHKYSVI
VDMSSPNIAKEMHVGHLRSTIIGESISRLLSFLGHKVLKLNHLGDWGTQFGMLITHLKEI
YPDHKTAPPISDLQAFYKTSKTRFDEEKDFNQRAHVAVVKLQQNDPEYVHAWKQICDISR
KEFDDVYRRLGIENLIERGESFYQSRMEEFVNDLKSQNVLQEDEGRLILWPPKCEVPLTV
VKSDGGFTYDTSDLTALLQRLHEEKADWVLYVVDMGQSVHLNTVFGGAEMLGYYNPNVHR
VQHIGFGVVLGEDKKKFKTRSGDTVRLVDLLDEGLERAKNRLLEKERNKELTEAEFERAQ
KAVAYGCIKYADLSHSRTIDYVFSFDRMLDDKGNTAVYLLYAYTRIRSIIRNAGYSERTI
NEISETVPLKFEHPMELTLAKALCRLPDILLKIQNDFLLHSLCDYLYDLSCDFTNFYDAC
YCIERNQETGDVQINKERIVLCEATARVMKCGFDILGIETVEKM
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgattatattcagaggaaagaagttaggtgcttacaaaacgaatatgataaa
cttctccagtccgccaatttttctgaaattaaaaaactgttggaagaaggtgagaagcta
aggtatcaagcaagccatctggaaaagtatctgaaacaattggaaaaccatgtgcagcat
aattctataagtatccaagctaccgtagctgctttgtttgattacgctataaaaacagtg
ttcataaatactaaacactgcgtacaactcaatgttcccaataagcgcagttttggggat
tatcagtgcaactctgctcttagcattcgaaaagagtcgaacagtgatcaaaatccattt
gatattgcaaaatctatcgttgccgctttacctgtcaatgacttaattgaaagagtggac
gttgttcttcctggcttcataaacatttggattaaacaacaattcatttccactgaagtc
agaaagattttacttcatggggttacacccccattcatacctcataaatactctgtgatt
gtcgatatgtcctctccaaacatcgctaaagaaatgcatgtaggacatctaagatcaacc
attattggagaaagtatttcccgtttgctttcatttttgggtcacaaagtactgaaactc
aatcatcttggagattggggaacacagtttgggatgttaataacccacttaaaagaaata
tatcctgatcataaaactgcacctccgatatcagaccttcaagctttttataaaacttcc
aaaactagatttgatgaagaaaaagattttaatcaaagagcacatgtggccgttgttaaa
cttcaacaaaatgatcctgagtatgtacatgcctggaaacaaatttgtgacatatcacga
aaagaattcgacgatgtataccgtcgactgggtattgagaatcttattgagcgtggagaa
tcgttttatcaaagtcgaatggaagagtttgttaatgatctaaaaagtcagaatgttctg
caggaagatgagggtagattaattttgtggccacccaaatgcgaagttcctctcacagtt
gtaaaatcagatggtggttttacctatgatacatctgacttaactgctttacttcagcgt
ttgcatgaagaaaaggcggattgggtcttgtatgttgtggacatgggtcagtctgttcat
cttaacacggtatttgggggtgcagaaatgcttggttattataatcctaatgtacacaga
gttcaacacattggattcggtgtggtgctcggtgaagataagaaaaaatttaaaactcgt
tccggtgacacagttcgtcttgtcgatttattggatgaaggtcttgaacgagcaaagaac
cgattgcttgagaaagaaaggaataaagagctaactgaagctgaatttgaacgagctcaa
aaggctgtagcatatggttgtattaagtatgctgatttatcacatagtcgaacaattgac
tatgtattctcattcgataggatgttggatgataaaggaaacactgcagtttacttgtta
tacgcatatacacggatcagatcaattataagaaatgcaggttattctgaaagaacaatc
aatgaaattagtgaaacagtaccactgaaatttgaacatcctatggagttgacattagcc
aaagcattatgtcgtctaccagatattctactaaaaattcaaaatgactttctattgcat
agcctatgcgattatttgtacgatttgagttgtgactttacaaacttttacgatgcatgt
tattgtattgaacggaatcaagagaccggtgatgttcaaattaataaagaacgtattgta
ttatgtgaagctactgctcgagtaatgaaatgtggatttgatatacttggaattgaaaca
gttgaaaaaatgtaa
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