Schistosoma haematobium (urinary blood fluke): MS3_00006402
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Entry
MS3_00006402 CDS
T05004
Symbol
COPB1
Name
(RefSeq) Coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shx04131
]
MS3_00006402 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shx04147
]
MS3_00006402 (COPB1)
Membrane trafficking [BR:
shx04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
MS3_00006402 (COPB1)
Exosome [BR:
shx04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
MS3_00006402 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT_2
HEAT
Coatomer_g_Cpla
RhoGAP
Sec8_C
Ribosomal_60s
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
24588208
NCBI-ProteinID:
XP_012792033
UniProt:
A0A094ZET5
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All DBs
Position
2:19782204..19796236
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AA seq
1078 aa
AA seq
DB search
MASDQICYTLVGLSSEAKTYTEQKLKDDLQNSNDNVKREALKELIRLIINGEKFPNLLMP
VIRFVMPSQDHMIKKLLLLFWEVVPKYSSDGKLLHEMILVCDAYRKDLQHPNEFIRGSTL
RFLCKLKEPELLEPIMPSIQQCLEHRHAYVRRNAVLAIFTIYKNFESLIPDAPEKILRFL
EQEQDSSCKRNAFMMLLHVSQSTALDYLTSCLDEVQNFGDILQLIIVELIYKVCLDKPSE
RLRFIRCIYSLLQSSSAAVRYEAAGTLTTLSSAPSAIKAAASCYINLILKESDNNVKLIV
LSRLTDLRQYHERILQDLIMDIVQIINASDMEVRQKTLNLTMDLVTARTAEELIKIFRKE
LIKACSTNTRPSASASDGEKSSADDQNSDESVYRFSLVHTIYDICLRFPEVLPSIVPTVC
EILTYEEIGDTRAANEACKFLREILERFPQRKADILEKLMQIFPSIIGRETLRHLVWIFG
EYCTTYEEINSFMTLIRQVIGELPLVDEELRRQASQVNSVNSSAENQSQPSVLISGDVNV
GVSPAQRVTADGTYATQSAFTLRSNKDSSSVNAIKRPVLQAALFESHYMPGVVLSACLVK
LFYRYSLLLKQEQMKTVKDECTKTKIISKENSFAAECMLIIASMIHLATSQLLPHQVNPD
HLDRMWICLKILADRRPEVLEAFEHTSRGCLTEMLAYQESERKNNAKARNQGLIEHQKQL
AELNRADAPIKFSLLTGQTEFGDTVDRFDLTLSQALGAGGKGSAGDAYATSKLSKVHQLT
GFSDPVYAEAYVHVNQFDILLDVLVVNQTKDTLQNLTLELSTLGDLRLVEKPSPLTIAPQ
DFANIKANIKVSSTENGIIFGNISYDVRGSSGETTCIVLNDIHIDIMEYIMPATCTPSEF
RQMWSEFEWENKVTVNTQIKDLFTYLSQITSHTNLRCLTPTEALSGDCDYLCVTLYAKTI
FGEHVLANLCLEKAEADQPVTGHVRIRAKTQGMAVTMGERVSSCQKNWPVNNSRTPSDNT
TKHQDDENSDENVKRSHSPVNNTLFKCDNLASHFGANFLLITGYHVGFSQTQYRIFTE
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgatcaaatatgctatactttagtcggtttgtcatctgaagcaaaaacatat
actgagcaaaaactcaaagacgatttgcagaacagcaatgataatgtgaaaagagaggca
cttaaggaacttattcggctaataattaatggcgagaagtttcccaatttattgatgcct
gtgattcgctttgttatgccgtcacaggatcacatgattaaaaagctgttgcttctattt
tgggaagttgtgcctaagtacagttcggatgggaaacttctacatgaaatgatactagtg
tgtgatgcttatcgcaaagatttacaacatccaaatgaattcatccgtgggtcaacttta
cgatttctgtgtaaattaaaagaacctgaattactggagcctattatgccatctattcaa
cagtgtctggaacatcgacatgcatacgttcgacgaaatgcagtgctggcaattttcacg
atatacaaaaacttcgaatcgcttattccggatgcacctgaaaaaattttaagattcctc
gaacaagagcaagattcttcttgtaaaaggaatgcttttatgatgttacttcatgtcagt
cagagtactgctcttgattaccttacttcttgtttggatgaagtacaaaatttcggtgac
attcttcagctcataattgtagagttaatctacaaagtatgtcttgataaaccttctgaa
aggctacggtttattcgttgtatttacagcttattacaatctagtagtgctgctgtgcgc
tatgaagctgcaggaacgctgacaacactaagttccgccccgagtgccattaaggcagcc
gcaagttgttacattaatttaatcctgaaggaaagtgataacaatgtgaaactaattgta
ttatcacgtctcactgatttacgtcagtatcatgagcgtattctacaagacctaattatg
gatatcgtgcagatcataaatgcatctgacatggaagttcgtcagaaaacacttaattta
acgatggatttagtgacagctcgtacagcggaagaattgattaagatatttcgtaaagaa
cttatcaaagcttgcagcacgaatacccggccttcagcttcagcgagtgatggagaaaag
tcttctgcagatgatcaaaattctgacgaatccgtttaccgtttttcactagtgcacact
atatatgatatttgcttacggttcccagaagtattaccaagcattgtaccgacagtttgt
gaaattttgacctacgaagaaattggcgatacacgagctgcaaatgaggcttgtaaattt
ttacgtgaaattttggagcgatttcctcaaagaaaggctgacattttggaaaaattgatg
caaatttttccatcgattatcggccgtgaaactcttcgacatttagtttggatttttggt
gaatattgtactacttatgaagaaattaactcctttatgactcttattcgccaggttatc
ggcgagctaccacttgttgatgaggagttacgcagacaagctagtcaagtgaattcagtg
aattcctctgctgaaaaccaaagtcagccgtccgtgctaatttcaggtgatgtaaatgtt
ggtgtcagtccagcacaacgtgttactgcagatgggacatacgcaactcagtctgctttt
actcttcgttcaaataaagattctagctcagtgaatgcaatcaaacgacctgtcctacaa
gcagctctattcgaatcacattatatgcctggagttgtattatctgcctgtttagtcaaa
ttattttatcgatattcattgcttcttaaacaagaacaaatgaaaaccgttaaagatgaa
tgcacaaaaactaaaataatttcaaaagaaaattcattcgctgctgaatgtatgcttatc
attgcgagtatgatacatttggctactagtcaactacttccacatcaagtgaatcctgac
cacttagatcgtatgtggatttgtctaaagatcttggctgatcgtcgtcctgaagtctta
gaggctttcgaacatacatctcgtggctgtcttactgaaatgcttgcataccaagagtca
gaacgtaaaaacaatgctaaagctcgtaatcaaggcttaattgagcatcaaaaacaattg
gctgagttgaatcgtgcggacgcgccgatcaaattctctctacttactggccaaactgag
ttcggtgacacagtagatcgttttgacttaacacttagtcaagcgctgggtgcaggtgga
aaaggcagtgctggtgatgcttatgctacatctaaactcagtaaggttcaccaattaact
ggcttttctgatcctgtatacgcagaagcgtatgttcatgtgaatcaattcgatattttg
ttagatgtattagttgttaatcaaactaaagatacactgcaaaatttaacattagaactg
tctacattaggcgatttacgtctggttgaaaaacctagtccattaacaattgcacctcaa
gattttgctaatatcaaagcaaatattaaggtttcttccacagaaaatggtatcatcttt
ggaaatatatcctacgatgttcggggttcatctggcgaaacaacttgcattgtgttaaat
gatattcatattgatattatggagtacattatgccagccacttgtacaccaagtgaattt
cgtcaaatgtggtctgaatttgaatgggagaataaggttactgtgaatacacaaatcaaa
gatctgttcacctacttatctcaaattacaagccatacgaatttacgttgcctaacacct
accgaggctctttcgggtgattgtgattatctttgcgtgacgctttatgccaagacaata
tttggcgaacatgttttagctaatttatgtttagaaaaagcggaagctgatcaacctgta
actggtcatgtacgaattcgagctaaaacacagggtatggctgttacaatgggagaaaga
gttagcagctgtcaaaagaactggccagttaataattcccgaaccccaagtgacaacact
acaaaacatcaagatgatgagaattccgatgaaaatgtaaaacgttctcattcaccagtt
aataatacattgtttaaatgtgataatcttgctagtcattttggagcaaactttctactt
atcacaggttatcatgttggattttctcaaacacagtatcgtattttcacagaataa
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