Schistosoma haematobium (urinary blood fluke): MS3_00006447
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Entry
MS3_00006447 CDS
T05004
Symbol
ERF1
Name
(RefSeq) translation termination factor eRF1
KO
K03265
peptide chain release factor subunit 1
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MS3_00006447 (ERF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00006447 (ERF1)
03012 Translation factors [BR:
shx03012
]
MS3_00006447 (ERF1)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MS3_00006447 (ERF1)
Translation factors [BR:
shx03012
]
Eukaryotic type
Release factors
MS3_00006447 (ERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Motif
Other DBs
NCBI-GeneID:
24598297
NCBI-ProteinID:
XP_051067789
UniProt:
A0A922IQU8
LinkDB
All DBs
Position
2:complement(21325083..21328855)
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AA seq
443 aa
AA seq
DB search
MASTNGSTEISQADKNVEMWRIKKLIKSLESARGNGTSMISLIIPPKDQITRIAKLLAEE
YGTASNIKSRVNRLSVLSAITSVQQRLKLYTRVPTNGLVVYCGTIVTEDGKEKKVNIDFE
PFRPVNTSLYLCDNKFHTEALVALLADDSKFGFIVVDGNGALFGTLSGNTREVLHKFTVE
LPKKHGRGGQSALRFARLRMEKRHNYIRKVAETATQLFITNDRPNIEGLILAGIADFKSD
LGQSDMFDQRLQAKLIKIVDISYGGETGFNQAIELATDTLSGVKFIQEKKLIQRYFDEIS
QDSGKYCFGVEDTLKSLEMGAVETLVVWENLSVNRYVLKVPNSEGNRVIHLRPDQETDRR
HFIDPATGSDLEILDTQLLLDWLALNYRSFGTTLEIVTDKSQEGAQFVRGFGGIGGILRY
QLDFNHLAGGDVDFEDDFNLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacaaacggcagtacggagatatctcaggctgataagaatgtagaaatgtgg
cggatcaaaaagttgatcaaaagtttggagtctgctagaggtaatgggacgagtatgatt
tcgctcatcattcctccaaaggatcagattactaggatagcgaaattgttagccgaggag
tatgggacagcatctaatattaaaagccgtgtgaatcgcttatccgtcctgagtgcgata
acctctgtacaacaacgtctgaagttatacactagagttcctaccaatggccttgttgta
tattgtgggacaatagtcactgaggatggtaaagagaaaaaggtcaacatcgatttcgaa
ccatttagaccagtaaacacgtctttatatctttgcgacaacaagttccatacagaggcc
ttagtagcgctgctagcagatgacagcaagttcggatttattgtcgttgatggtaatggg
gctttatttgggacattatcgggaaacactcgcgaggttctgcacaaatttacggtagaa
ttgccgaaaaaacatggtcgcggaggtcaatctgcacttcgtttcgcacgtttgcggatg
gaaaagcggcacaactatattcgtaaagtagccgagacagcaacgcaactttttattaca
aacgatcgaccgaatatcgaaggtcttatccttgcggggattgctgacttcaagagtgac
ttaggacaatctgatatgtttgatcaaaggcttcaagcaaagttgattaaaatagtagat
atatcatatggtggtgaaacaggatttaaccaagctatcgaactggccacagatacactt
tctggcgtaaagttcattcaggaaaaaaaactgattcaaagatactttgacgagatatct
caagatagtggaaagtactgttttggtgttgaggacaccttgaagtccctagagatgggt
gctgtggagaccctcgtggtgtgggagaaccttagtgtgaaccgctatgtcctcaaagtc
ccgaattctgaaggaaatagagttatacacttgcgtcctgaccaggaaacggaccgacga
catttcattgacccggcgacaggatctgatttggaaattctagatactcagcttctttta
gactggctcgccctgaactacagatcttttgggacgactttagaaattgtcactgacaag
tctcaggaaggtgctcagtttgttcgcggctttggtgggataggtggtattctacgctac
caactcgattttaatcatttggcgggtggagatgttgattttgaggatgacttcaatctt
gatgattactga
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