Schistosoma haematobium (urinary blood fluke): MS3_00006837
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Entry
MS3_00006837 CDS
T05004
Symbol
MED13L
Name
(RefSeq) Mediator of RNA polymerase II transcription subunit 13-like, variant 2
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shx03021
]
MS3_00006837 (MED13L)
Transcription machinery [BR:
shx03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
MS3_00006837 (MED13L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Get5_bdg
Motif
Other DBs
NCBI-GeneID:
24589831
NCBI-ProteinID:
XP_012793709
UniProt:
A0A095AIS9
A0A6A5E2K4
LinkDB
All DBs
Position
2:36238525..36268574
Genome browser
AA seq
2399 aa
AA seq
DB search
MSSMSQLTGPNDASLEHCFTNIFALTDFSGIQYRKYILHTPKEYHDPLNDPIIKSYTLCQ
KYGVLSAWVRSKPESSDLSNPCAFSKFAKELWVFWYGNDDFPNADICILPELRREDHGNW
RQGLSYETRTVLFRALHNVVERCLLTKGFVRLGKWFVQPRKCGCNDDNVQYSVSFSFFLH
GESTVCASLDIRQHAAVQRVGVEHIQSCVTSQSTIPVILAPYGISAELTGFGFEKKDGDL
MVESEAWSTFYPLRPSHECDPSMSGVTGLPFFAMATPTHQNPRQQNRFSSDKKRTVEEIN
RRCLDTPPKFVEVIVDGFRMRYPMCFVLITTVNDSPSQPEYNPTPYGEAIHLSDVSGHNL
STNVSAPHMSNKCSVYNAHIPNKIKTSRFWRVNKQRKLPSIKMNTPGTSLLKAVIPSSSL
QSDFLVDVRHIYLAGRTLQCASQHNRLPSVKPEWQSKRSHSTDKSDMGCSTDGLITSVSP
EMCSLYIQAPCTILQCCCNRFSRVRRTSVGGSFHQQDPCIRHSLKSSIHFNVPLCDRPRT
PLPIITTNLTAAHDPSMPTLSPQQPAPNQNSNLSSNTLNELNNDFVCDQNTSQTTPSSTH
LSTAPQPPSLLPKPESNSALSSVLKIPNGLVTTDSPVSSDHQTQYAKMSARHIPIASVSV
MKRNLFNTWLARHAAQELQKEPSSDIKRPSLCLRIPDRIEREQYICPEGITLQSTLEQSS
PSFPNYSIIDDNTSYKENNVTTDEYSFRNKRPRTAICRTDFNECSLNDGAQGITTDITNV
NFTSANSYSPDMKVGVTECNGLIDDQHINPGALETNTHSGLMHSNGSIINNSSGTFSRNV
GLITHRGVSLASSTGSGPIGPAELALMLPTPPSHDAPQPSPVDGVSVSTNRMNPSTTSVS
TPGPGSPSVQTIQDSLSSNVADTSSHSIPVPFQSANSPPSCQNQELWHLAKLPCIQNLSS
VSMESQDWSFVQPCAAYLGMTSNYQIPHDEISLFAKSLPQLKWSYDHRASNQKSVTSDCL
DPHFTPNGLIVNTGNQSATSKSWLMSPNSFPLTSLHRNVANTDNKPCSPQQLNESGTTYS
ITGFVKSADCTNPNTNYVEDFTEWLASLLETNGLLVNLILSDSMLNLFKDHNFDSCNICE
CTSSILGSEIGLYLSNSISTTSPCSRSGRTNTSTFGSHDLVGGSGFHFTRGCKCGFSAVM
NQKYVVNGNLFYEDEIEVTRLSVRSSLSQNNENPYTRPPNYRTRPGWWVTSSHPSVSHLL
LLQRIMSSVFEEFSVRQITDQLRWNMLSCDQVIKENKLEYDDACALISSAIRNSVETVRP
RRVVGHVDNIDSITNGTPHPASETGAYIHPSFFLKAHSKMPQNQNDQIRLLTTMRPWLQE
AISSTRMLESNYTVDGPLTWKAFHQLAGRGSDETCKPQPIPQLRVSSCDQENLLISPFAL
RDWDRLSLFPLSRPKRIAYAVILPSDSHILSDLTYSIPNVLMSEGTDANSSSTSNSLRRT
LIDFLKELSHTYEACHLGQHFPYYKPEAGSPDTAFIPVFPNPERLSISESDNFVSIHPDL
LKTLTEQLGNHSLYGESILRIIQNYACSSVNSAIAALKKHGVAVEFSSDTNLRSALFPPF
ESIKSEKPNVPVKISQDDIKLNIVNRLSVPSRMDSSCSVRYSNGDGSFTTSLDTSSWGAG
SDVYLVIYILNPFCYLYDISMELGRLVMQSLVGSANHILNSLPESWRARVTTQILSVDHV
MSDYLPRLRPLALAIYTSVNRFIEPSLINANRTLTGIGPAAEKEIISNDKDSFHKRTIFA
PPYTLMNSRDVLSQLDISSEPIDRSSVLFVAYCLSQDQQWLLATFTDEQGGLLDHTLINI
RVPTRYFTEIENQRFQPTESNKHILSPRRIGLARLWDYIINLISQTANAWRLVVGRIGRL
GQGELKGWNGLLGRKSLQDVNKFFRERCTACSISSCVPSHSSSINNGSKPMLNLVNSFTG
ASSCTHELPSLISACLVSLEPQSTFRVYPGFGLCSDESWTYGGGGGGSNAGGGGGSGSAG
STGGSGGLSNGANSAFYGANASPLAMRMMSLLGTPTTSTETPSATHILVFPTSTSASGVS
EHEPSGLAEVIYGMGSDDMNVFDWLLPNDPGLDDLVPPNGSTAEMLADFGNPSELNFGLS
DLGPPVCVSGVNDGTGKSSNGRLGDGSDVLHGHNEYAVGLHDNRGHGCSDVMGLRGLDSG
LLDLGPNHVSNVGGYLSEHSFSHAINPLNTMPFGIHDPTDEVGSLMQQPLAMGYYISTAS
AGPLPSWFWIACPHSKFQYPVCLKSALHLQTTLVGVDDAAAAAPPPTGGSSGPGVGPSSN
RPGHLLDSSSTCDVLRYVLETYNALSWLTIDPTTNDRRTCLPIHILSLSQIYQAFEAFT
NT seq
7200 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtatgagccagttgacagggcctaatgacgcttcacttgagcattgcttcact
aatattttcgccttgactgatttcagtggtatacagtacagaaaatacatccttcatact
cccaaagaatatcatgacccgctaaacgatccaattattaagtcgtacacactgtgccaa
aagtatggcgttctttcagcctgggtgcgctcaaagccagagtcatctgacttatcaaat
ccttgcgctttttcgaagtttgctaaagagctctgggtgttttggtatggaaacgatgac
tttccaaatgctgatatctgtatactgccagaactccgtagggaggaccatggaaactgg
cgacaaggtttatcatatgaaacaagaactgtcttgtttcgggccttgcacaacgttgtt
gaaagatgtctgcttactaaagggtttgtccgcttaggaaaatggtttgtacagcctcgt
aaatgcggttgcaatgatgacaacgtacagtacagtgtcagtttttcgttcttcctacac
ggtgagagtacggtgtgtgccagtcttgacattcgtcaacacgctgctgtccaaagagtt
ggagttgaacacatccagagttgtgtcacaagtcagtcaaccatacctgttatcctggca
ccttatggaatttctgcagagctgacgggtttcggttttgaaaagaaggacggagatctg
atggttgaatcagaagcatggtcgactttttaccccctcaggcctagtcacgaatgtgac
ccttctatgagtggtgtaactggtctgccgttttttgctatggctactcctacacatcag
aatccacgtcagcagaatagatttagtagtgacaagaagcggacagtagaagaaatcaat
cgacggtgtctagataccccacccaaatttgttgaggtgatcgttgatggttttcgtatg
agatacccgatgtgctttgttctaataaccactgtaaacgattcacctagtcaaccggaa
tataacccaacaccttacggtgaagcaattcatttatcagacgtttccggtcataattta
tctacgaacgtatcagcgccccatatgtcgaacaaatgttctgtgtataatgcccatatt
cctaataagataaaaacatcacgcttctggcgagtaaacaaacagaggaaactcccgtct
ataaaaatgaacacacctgggacgtctttgctgaaagcagttattcctagtagttctttg
cagtctgattttttagtagatgttcgtcatatctacctagctggaagaactctccagtgt
gcatcgcaacataatcgtcttccttctgtgaaaccagagtggcaatcaaaacggtcacat
tctactgacaaaagtgatatgggttgtagtactgatgggctcataacttcagtatcaccc
gaaatgtgctcattgtacatacaagctccatgtactatcttgcagtgctgctgcaacagg
ttttctcgggttcgtcgcacttctgttggtggctcgtttcatcagcaagacccctgtatt
cgacattctttgaagtcatctattcatttcaatgtcccgctctgtgatcgtccaaggact
ccgctcccaatcattacaaccaacttaactgcagcccatgacccatctatgcctactctg
agccctcagcaaccagctccaaaccaaaattcaaaccttagttctaataccctcaatgaa
ttaaataacgatttcgtttgtgatcagaatacttcccagaccacaccttcatccactcac
ctttcaacagcgccacaacctccatcacttcttcctaaacctgaaagtaactcggcttta
tcttcggttttaaagatacctaacggtttggtgaccaccgattcacccgtttcttcagat
caccaaacacaatatgcaaaaatgtcagcccgacacattccgatcgcttctgtatctgta
atgaaaaggaatttattcaatacttggttagccagacatgcagcccaggaattgcagaaa
gaaccatctagtgacataaagcgtccaagcttatgtctcagaattccagatcgaattgaa
agagaacagtatatatgcccagaaggcattactttgcaatctacccttgagcaatcatcc
ccatccttcccgaattatagtattatcgatgacaatacatcgtacaaagaaaataatgta
actactgacgagtattcgtttagaaacaaacgccctcgtactgctatctgccgcactgat
ttcaacgaatgcagtttgaatgatggcgcacaaggaattacaacagatatcacaaatgtc
aacttcacttctgccaattcatattccccggatatgaaggtcggagttacagaatgcaat
ggtttaatcgatgaccaacacattaatccaggagcattggaaacaaatactcattctgga
ttgatgcattctaacggttccatcataaataattcaagtggcactttcagtcgcaacgtt
ggactaatcactcacagaggagtcagtctcgctagcagtacaggttctggaccgatcgga
ccagcagaactagctttaatgcttcccacaccaccatcccatgacgcacctcaacctagt
cctgttgatggtgtctcagtgtccaccaaccgtatgaacccttcaacaacttcagtaagc
acccctgggcctggctctccgtctgttcaaacaatccaggactcattatcttccaatgta
gcagacacatcgtcacattcgattcctgtacccttccagtctgccaattcgccaccgtct
tgtcaaaatcaagagttatggcatcttgctaaactgccatgcattcaaaacctcagtagc
gtcagcatggaatctcaagactggtctttcgttcaaccttgcgctgcctatctcggtatg
acaagtaactatcaaatccctcatgacgaaatttcattattcgcaaagtctctacctcag
ctgaaatggtcatatgaccatcgtgcatcaaaccaaaaatctgtcacatcagattgttta
gatccacattttacacctaatgggttgattgtcaacactgggaatcagtctgcgacatct
aagtcttggctaatgtctcccaattcttttcctctaacttcattacatcgaaatgttgca
aacactgataataaaccttgttcacctcaacaactgaatgagtctgggactacctattct
atcacagggtttgtgaagtcagcagattgtacgaatcctaataccaattacgtagaggat
ttcacagagtggttagccagcctacttgaaaccaatggacttttagtaaatttaatcctt
tcagattctatgctaaatttattcaaagaccataattttgattcctgtaacatttgtgaa
tgcacgtcatccatacttggctctgaaattggtctttacttatccaattcaatatctaca
acgtcaccttgtagtagatcaggacgaacaaacacttcaacttttggaagtcatgatcta
gttggcgggtctgggttccattttacacgaggatgtaaatgtggtttcagtgctgtgatg
aaccagaaatatgtagttaatggaaatctattctatgaagatgagattgaagtaacccga
ttgtctgttcggtcttctttgagtcagaacaatgaaaatccatatactcgtccaccgaac
taccggacacgtccaggttggtgggtaaccagttctcatccttctgttagtcatttgctt
ttacttcaacggataatgagtagcgtatttgaagaatttagtgtacgacagataacagat
caactaagatggaatatgttgtcgtgtgaccaagtcattaaagaaaataaactagaatat
gatgatgcttgtgctctaatttcgtcggctattcgcaattccgttgaaacagtgcgtcca
cgcagagtagttggccatgttgacaatattgattccattaccaatggtacacctcatccg
gcttccgaaactggtgcgtatattcacccatctttttttctaaaagctcattctaagatg
cctcaaaatcaaaacgaccagattcgcttattgacaacaatgcgtccttggcttcaggag
gccatttcgtctactcgtatgttagaatcaaactatacggttgatggaccattaacttgg
aaagcattccatcaacttgctggtcgaggctctgatgaaacttgtaaacctcaaccgatt
cctcagttgcgcgttagcagttgcgaccaagaaaacttgttaatttctccattcgctctt
cgtgattgggaccgattatcactatttccattatcgcgacctaaacgtattgcttatgct
gtgatcttgccttctgactctcatatactctctgatttgacatatagtattcctaatgtt
ctgatgtctgagggcaccgatgcaaattcttcatcgacctcaaactcactaagacgtact
cttattgattttctgaaagaactgtcacatacctatgaagcttgccatcttggccagcat
ttcccgtattacaaaccagaagcaggttctcctgatacagcgtttatacccgtctttcca
aatccagaacgtctttcaatatcagaatctgataacttcgtaagtattcatccggatctt
ctgaaaactcttacagaacaactaggtaatcattcactatatggagaatcaatactacga
attattcaaaactacgcctgctcttcagtgaactccgccatagctgcattgaagaaacat
ggtgttgctgtggagtttagttctgatacgaatcttcgctctgccttgttcccacctttt
gaatcaataaagtcagagaagcctaacgtccctgtaaaaatcagtcaagatgatataaaa
ttgaatattgtaaaccgactttcagttccaagtagaatggatagtagctgctctgtacgc
tacagtaatggtgatggttccttcaccacatccttggatacatcctcttggggagcgggg
agtgatgtttatttagtaatatacattctaaatcctttctgctacttgtatgatatcagt
atggagcttggtcgtcttgttatgcagtcattagtcggttctgccaatcatatattgaat
tctttgcctgaatcgtggcgtgcacgtgtcactacacaaattttatcagttgatcatgtc
atgtctgactatttgccccgtttacgacctttagcactggcaatttacacatctgtgaat
cgtttcattgagcccagtttaataaatgcaaatcgtacattaacgggtataggtccagca
gctgaaaaggaaattatttcaaatgacaaagacagcttccataaacgaactatatttgcg
cctccatatacgctcatgaactcacgtgatgtactcagtcaactagatatttcatcagaa
cctattgaccggtcgtctgttttatttgttgcatattgtctttcacaagatcaacaatgg
cttcttgctacatttacagatgaacaaggtggattattagatcatactttaattaatatt
cgtgtcccaacaagatattttactgaaatagaaaatcaacgttttcagccaacagaatca
aataaacatatattaagccctcgtcgtattgggcttgcacgactttgggattatattatt
aatttgatcagtcaaactgccaacgcttggcgacttgtagtaggaagaattggtaggttg
ggacaaggagaactaaaaggttggaatggactgttaggacgcaaaagccttcaggatgta
aataaattttttcgagagcgctgtactgcatgtagtatatcatcttgtgttccttcacat
tcgtcatccattaataatggttctaagcctatgttaaatctagtcaatagtttcactgga
gccagtagttgtactcatgaactcccaagtttaatcagcgcgtgtcttgtttctctcgaa
cctcaaagcacatttcgtgtatatcctggttttggtttgtgttcagatgaatcatggacg
tacggaggtggtggaggcggtagtaacgcaggtggtggtggtggctctggaagtgcaggt
agcactggtggtagtggtggtctgagtaacggcgctaacagtgcattttatggagccaat
gcttcaccattagctatgcgtatgatgtcacttttaggtactccaacaacgtctacagaa
acacctagtgcaacccatattcttgtctttcctactagtacttcagcaagtggtgtgtct
gaacatgagccttcaggattagctgaagtcatctatgggatggggtccgatgatatgaat
gtatttgactggcttcttcccaacgatcctggccttgatgatctcgttcctccaaacgga
tcaacagcagaaatgttggctgacttcggtaatccatctgaattaaatttcggcttgtcc
gacctaggtccacctgtttgtgtcagtggtgttaatgatggtacggggaagtcatctaat
ggtagattaggcgatggtagtgatgttttgcatggacacaatgagtacgctgtcggtctt
catgacaatcggggacatgggtgttctgatgttatgggtttacgtggacttgattctgga
ctactggatttgggaccaaatcatgtaagtaacgttggaggttatttgagtgaacattca
ttcagtcatgctataaatcctctcaacacaatgccattcggaatacatgatcctacagat
gaagtgggaagtttaatgcaacaacccttggccatgggatattacatatctacagcttct
gctggtccactgccctcgtggttttggattgcttgtccgcattccaaatttcagtatcca
gtttgtttgaagtctgctctgcatttgcaaactacactggttggtgttgatgatgctgca
gccgcagctcctccaccgactgggggttcaagcggtccgggagttggaccgtcgtcaaat
cgtccgggacatcttctagattcaagcagcacatgtgatgtattaagatacgttttagaa
acatataatgctttatcttggttaaccattgatccaacaacaaacgatcgtagaacttgc
ttacctattcacattctttccttatcacaaatataccaggcttttgaagcattcacttga
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integrated database retrieval system
