Schistosoma haematobium (urinary blood fluke): MS3_00007153
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Entry
MS3_00007153 CDS
T05004
Symbol
RPAP3_1
Name
(RefSeq) RNA polymerase II-associated protein 3, variant 2
KO
K23002
RNA polymerase II-associated protein 3
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shx03021
]
MS3_00007153 (RPAP3_1)
Transcription machinery [BR:
shx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
MS3_00007153 (RPAP3_1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_11
TPR_8
TPR_9
TPR_17
TPR_12
TPR_16
TPR_14
TPR_19
TPR_BSK1_C
ARM_TT21_C
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
24595139
NCBI-ProteinID:
XP_012799195
UniProt:
A0A095AXM8
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All DBs
Position
4:224922..234529
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AA seq
511 aa
AA seq
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MDPEKFLNFQMQMRENNLEVENFLNDFEAWKETVGSKSKQLESTCQPELPAIRNSLLKKH
KKKAVKQSVNNKKVERIKSYDYRAWDKFSAKQALDDDEHNDDRDVDRNFTSPNDQDCSSE
TDEEQEDQRRIQLSKEARELGNVRFKEGKLNEAIEHYTMAIRLAPEDSIPYINRAFAYIK
TERYASAEADCTAALRLDRTSVKAFYRRALARKGLGHITGAIEDLKELLRFDSDNKTAIN
ELEALIGKKKVAHISNSTVSCSSIQSSNPRKMRRIPIIEVDDDNHNKQMLSTPVQNSTKS
VCTNDDSSVSNNNKCSILNKDQSKNENVLHSTPQTSDRLESRNISSSTSTPIVPTSETIN
PGIDHNFKRQLPLLNTNLHKPPSNWFQLERELRELCQRNSSSNYQPNLNKEAIIYLCNIQ
PVHYVKLFGENMESDFVSRMLQAFYLSDQLTNQHIVERLLFLSKLPRFDIAWMMVDGSER
VNIIKFIKNLQNDNSLDKELLKQIYVQFECE
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgagaagtttttaaatttccaaatgcaaatgcgtgaaaataatttagaagta
gaaaatttcctaaatgattttgaagcatggaaggaaacagttggatcaaaaagcaaacaa
ttagagagcacatgtcaaccggagttgccggctattcgtaatagtctactaaaaaagcat
aaaaagaaagcagttaaacaaagtgttaacaataaaaaggttgaacgaatcaaatcatat
gattatcgtgcttgggataaatttagtgctaagcaggccttagatgatgatgaacataat
gatgatcgtgatgttgatagaaacttcacttctcctaatgaccaagattgcagtagtgaa
acggatgaagaacaagaggatcagagaagaattcagttatctaaagaagctcgtgaacta
ggcaatgttcgttttaaagaaggtaaactaaatgaagctattgagcattacactatggcc
atacgacttgcacctgaagattctatcccatatataaatcgtgcatttgcttatattaaa
acagaacgttatgcatcagctgaagccgattgcacagccgctttaagactagatagaact
tctgttaaagcattttatcggagagcacttgctcgaaaaggtttgggtcatattactgga
gcaattgaagatttaaaagaattgcttagattcgattcagataataaaactgccataaat
gagctcgaagctttaattggtaaaaagaaagtcgcacacatatctaattccaccgtgtct
tgtagttcaatccagtcgagtaatccgagaaaaatgagacgaataccaatcattgaagtc
gatgatgataatcataataaacaaatgttgagtacacctgtgcagaatagtacaaaatct
gtgtgtactaatgatgatagttccgtctcaaataataacaagtgttctattttgaataaa
gatcaatcaaaaaatgagaatgttttgcattcgactccacagacatcagatcgtttggaa
tctcggaatatatcctccagtacgtcaacgccaatagtaccaaccagtgaaacgattaat
cctggaattgatcataattttaaacgacaactcccattgttaaatacgaacttacacaaa
ccaccatcaaattggtttcagttagaacgtgaactacgtgaattatgccaaagaaattct
tcatctaactaccagccaaaccttaacaaagaagcaatcatttatttgtgtaatattcaa
ccagttcattatgtgaagttattcggtgaaaatatggaaagtgatttcgtatcacgtatg
ctgcaagcattttatctttcagatcaattgacaaatcaacacattgtagaacgtttatta
tttttatcaaaattgccaagatttgatattgcttggatgatggttgatggatcagaacgt
gtaaatataattaaatttattaaaaatttacagaatgataattcacttgataaagaatta
cttaaacaaatttatgtacagtttgaatgtgaataa
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