Schistosoma haematobium (urinary blood fluke): MS3_00007255
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Entry
MS3_00007255 CDS
T05004
Symbol
TBL3_1
Name
(RefSeq) Transducin (beta)-like 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MS3_00007255 (TBL3_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shx03009
]
MS3_00007255 (TBL3_1)
Ribosome biogenesis [BR:
shx03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MS3_00007255 (TBL3_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Utp13
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_Aladin
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_DCAF12
RMC1_N
DUF5517
Motif
Other DBs
NCBI-GeneID:
24589610
NCBI-ProteinID:
XP_051066032
UniProt:
A0A922LGB4
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Position
4:complement(5513693..5557390)
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AA seq
933 aa
AA seq
DB search
MATKLKFKLADKFQPCFNSQYPIFHTKSGKIYCGRDVDDSLCINVLDENSFTLVNRIQDD
EVMTSFVVDEAGSEIFIATKNLLLRRLDSLSLRPTKVWMSCHQRIVQKMALNKTSTRLAT
GSGDMVVRLWHIGPKEGFSKSCRLHQGMITLLKFHPTLPYLFSSSVGDHFVAVWDTETGK
HVSSLEGHQSIVTSLDFSAGKDELVTCGRDKVLIVWSFVDFTKQKVIPTFESLEACTFLP
VGALTNHLGHTFSESNTLLLTGGQWGCLRCWDVDTGRCVLEIKGPLDRTPQSDSSSSTAL
DRHSIDYGLHSISHLNVYNIKDSNDNVLDESENSSLRLILVRQSNHVEFYNPMLGKLTAE
FLGDIGQVDQLCIVGKNHNYLILADASPHMKIFLNPYGLSLKGKNTTEDNLNNKTNGSWK
CHLIPGGHTDVIMDLTVSICGQWIASGSKDQSICLWHLIESEDSISSSLHKSKNVPVKLD
LITQIHKAHAAHISSVCFDRLTTHLISSSEDGILKVWNVQCNNLDKPDSVLSELNTIHGA
HGGVINSIDVSVDNRLVATASRDKTVKIWEFKKQSLHCQGVLQGHRRGVWSVCFSRFEKI
ALTASGDGDVRLWNLKDFSCIRTLEGHDQPVYKAVFLSHDKQILSCDQKGLIRLWNISKP
PKNNQEKSENFDKPSSEETSSLVYEAHDGRIWSLAICPDESGFFTGGEDETLCYFEDITE
ILLNETSQQQEEYIQTQQELDNLVHKQMYADAVHLAVKLDQPKRTLDILQELLTQDNFKQ
TCKDNQSIKYPTQAANLLSVLDDFANKSHSESLNDSLNLSQRLLSYAINWNTRTRTSMIS
QFVLNWILTRWKPEELLEWPNFSQAIQYLLPYTTRHYQRICRLEEQLAILNYISEVTDEH
LISTDAFDEPMELDNDQNNVSFNSTQNVNTSLS
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggctactaaactaaagttcaaactagctgataaatttcagccttgctttaactctcaa
tatccaatcttccacactaagtcaggtaaaatttattgtggaagagatgttgacgactca
ctgtgtataaatgtactcgatgaaaattcgttcactttggtcaacagaattcaggatgat
gaggttatgacatctttcgttgtcgatgaagccggatcggagatatttattgctactaag
aacttgcttttaagacgtcttgatagcctttctctgaggcctacaaaagtatggatgtct
tgtcaccaaagaatcgtgcagaaaatggcgcttaacaaaacttcaacacgattagctacc
ggttcaggagatatggttgttagattatggcatattggtccaaaggaaggcttctcaaaa
agctgtcgactgcaccagggaatgataacactattgaaattccatccgacactaccgtac
cttttctcatcgtcagtgggtgatcactttgtagctgtgtgggacactgagactggaaaa
catgtctcttctcttgaaggtcatcaaagcattgttacaagtttggacttcagtgctgga
aaggatgaattagttacatgtgggcgcgataaagttcttattgtctggtcgttcgtagac
ttcacaaaacaaaaagtcatacctacctttgagagcttagaagcttgtactttccttcct
gttggcgcattaacaaatcacttgggtcacacgttttctgaaagcaatactttattgttg
actggcggtcagtggggctgtttgcgttgctgggatgtagatactgggcgttgtgtgtta
gagatcaagggtcccttagatcggactcctcagtctgattctagtagttccactgcgtta
gatcgccactcaattgactatggacttcattccatcagtcatttgaatgtatacaatata
aaagacagtaatgataatgtgttggatgaaagtgaaaactcatccttacgattaattctt
gtgcgtcaaagtaatcatgttgaattttataacccaatgctcggcaaattaacggctgag
ttcttaggtgacattggacaagttgatcaattatgcattgtaggcaaaaatcacaattat
cttattctagctgatgcgtcacctcacatgaaaattttcctaaatccatatggactcagt
ttaaagggaaaaaatacaactgaagataatcttaataataaaacaaatggttcatggaaa
tgtcaccttattccaggtggtcatactgatgtgattatggatttgactgtatccatatgt
ggtcaatggattgcaagtggttctaaagaccaatctatttgtttatggcatctaatagaa
tcagaagattcaatatcgtcatcactacataaatctaagaatgttcctgtcaaattggat
cttattactcaaattcataaggcacatgctgctcatatcagttctgtttgctttgataga
ttgacaacacatcttatatctagttcagaagacggtattttaaaagtttggaatgttcag
tgtaataacttagataaaccagattctgtgttatcagaattaaacacaattcatggagcc
catggcggagtaatcaattcaattgatgtttccgttgataatcgtcttgttgctactgca
tcacgtgataaaactgtcaagatatgggaatttaaaaaacaaagtttacattgtcaaggg
gttcttcagggtcaccgtagaggtgtttggtctgtttgcttttcaagatttgagaaaatt
gcacttactgcttcgggtgatggagatgtgagattgtggaatttgaaagatttttcgtgt
atccgtacattggaaggccatgatcaaccagtgtataaggcagtttttctttctcacgat
aaacaaatattatcatgcgatcagaaaggattaataagattgtggaatatatctaaacca
cccaagaataatcaagaaaaatcagaaaattttgataaaccatcctctgaagaaacgtca
tctttagtttatgaagcacacgatggaagaatatggtcattagctatttgcccagatgaa
tctggttttttcactggtggtgaagatgaaacattgtgttattttgaagatattacagaa
atattgctgaatgaaacatcacaacagcaagaggaatatattcaaacacaacaagaattg
gataatcttgtacacaaacaaatgtatgccgatgctgttcatttggctgtcaaattagac
caacccaagcgaacattagacatactacaggaacttttgactcaagataatttcaaacag
acttgcaaagataatcaaagtatcaaatatccaacacaagctgcgaacttattgtcagta
cttgatgattttgcaaataaaagtcacagtgagagtcttaatgattcacttaatctaagt
caacgacttttatcttatgctatcaactggaatacaaggactagaacatcaatgataagt
cagtttgtattgaattggattctaacccgttggaaaccagaagaattacttgaatggcca
aattttagtcaagcgatacaatatctccttccgtatacaactcgtcattatcaacgtata
tgtagattggaagaacaactggcaattttaaactatatttctgaggtgactgatgaacat
ttaatttctactgacgcttttgatgaaccaatggagttagacaatgatcaaaataatgta
tcatttaattcaactcaaaatgtcaatacttcactttcttag
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