Schistosoma haematobium (urinary blood fluke): MS3_00007271
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Entry
MS3_00007271 CDS
T05004
Symbol
SMC1B
Name
(RefSeq) Structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shx03036
]
MS3_00007271 (SMC1B)
Chromosome and associated proteins [BR:
shx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
MS3_00007271 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
MS3_00007271 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
AAA_15
Tropomyosin
ABC_tran
SbcC_Walker_B
DUF1482
Motif
Other DBs
NCBI-GeneID:
24596132
NCBI-ProteinID:
XP_051066057
UniProt:
A0A922LFN1
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All DBs
Position
4:complement(6371924..6418376)
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AA seq
1234 aa
AA seq
DB search
MDENCGRLKYIELENYKSYKGKQVIGPFSVFTAIIGPNGSGKSNLMDAISFVLGENTRHL
RVRRLNDLIHGSVVGKPVAKSASVTAVYEMPDGEEKRFSRVIHGNTSEYRINGVSVRVDE
YAAALEQIHIFMKVKNFLVFQGAVESIAMKNARERCQMFEEISKSAELKEEYDLSKMEMQ
KLEENATFNLNKKKGIVAERKEAKIEIDEAERYKKLQNELTKKRLELHLFKLYYNDLEIR
HVREELKQREEAVAAEHEQRQLIEEEMKEKRRELGKINRDQSSLEQEIKKCEQKIGKRKP
EFIKVSQLLRHVSEKHKESKKSLENARQLHSTHLQEIDQLEAEYEKISDIQRDYEQQQSK
KSLEQGRDLELEETQLSEYHRLKQKVAERTSHLSAVLDNLNREYNEQKDLYDALYRRKNE
IESSLKRKETELNENKKRLQKLLEYIDSSNRAITEQRETEKAIREEVELATRRIDEINAE
LETVVCQLGEAKVERHESSRAAKKQELIENLKRLFPGVHGRLLEMCQPSHRRYQVAITKV
LGKYMDAIVCDSEKTAKECIQYMKDQRIEPETFLPLDFLDVKPIDEKLREISDPPNVHLV
IDVIQCDPIIVKKALTFACGNALVCETVEHARYVAYHMGDRKKTVSLEGTLFQRSGVISG
GASDLKARARRWDEKQISTLMSKRDALQNELKEQLKRKRKEAELRTIQSQIKGLDTRLKY
TLKDKDSTEEKLLSTNEEEMNQIARELEEVEESLGRCQTKMQELQISVNAEKAKMDTVED
TVFHDFCVQIGVENIRQYEDRELRVARERDRKRLEFTNQLQRINNQLEYERSRDTEANVK
RWEETVSVERTEMDKCKKQEKKIKEEMEQEEKKKTEVESRVGELKYRAEMLDGELGEIRR
RLVNKQRDIQKLQKDLNQAEAKLESRRAERHSLLQAAKMEDLDLPLKQGCDPIPELNSQL
TDSENMDPSTEEMAHIYELEARLPVDFKHLDKPLRQMTDEKEVNRKAEEMQNQVDSMLNS
LARIQAPNLRAGDKLGSVEERLRSTEAEFEDTRRRAKRAKARFERVRRLRYNAFMNCFNS
IADNIDPIYKSLSRNPGAQASLLPTNAEEPYLEEIQFQCVAPGKRFQQMDSLSGGEKTIA
ALALLFAMHRYNPSPFFVLDEIDAALDNTNIGKVASFIREYASARAQIIVISLKEEFYSR
ADSLIGIYPDIENNCLVSRVLSFDLSKYIDTGEQ
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaattgtggacgtttaaagtatattgagctagaaaactacaagtcctataaa
ggaaagcaggtaattggtcctttcagcgtattcactgctattattgggccaaatgggtcg
ggcaagtcaaatttaatggatgctattagctttgttcttggagaaaatactcgacattta
cgtgttcgtaggcttaatgatttaatccacggttcggtggttgggaaacccgttgcaaag
tcagcatcagttactgcagtttatgaaatgcctgatggggaagaaaagcgctttagtcgt
gttattcacggcaatacatccgagtaccgaataaatggggtctctgttcgtgttgatgaa
tatgctgctgctctggaacaaatacatatatttatgaaggtgaagaactttctggttttc
caaggtgctgtggaaagtatagctatgaaaaatgcacgtgaacgttgtcagatgtttgag
gaaattagcaaatctgctgaattaaaagaagagtacgatttgtcgaaaatggaaatgcaa
aagctggaggagaacgcaactttcaacttgaacaagaaaaaaggcattgttgctgaacga
aaagaagcaaagatcgaaatcgatgaagctgagaggtacaagaaactgcaaaatgaattg
acgaagaaacgactggaacttcatttgttcaaactttattacaatgatttggaaattaga
catgtacgtgaggagctcaaacaaagagaagaagctgttgctgctgaacatgaacagcgt
cagttgattgaagaagaaatgaaggagaaacgtcgtgaattaggcaaaatcaatcgagat
cagtcatctctagaacaagaaattaagaaatgtgagcaaaagattgggaagaggaaacct
gaatttattaaagtttcgcaactcttgcgtcatgttagcgaaaagcacaaagagtccaaa
aaatccttggagaatgctagacaactgcatagtacacatctacaagaaatcgatcagtta
gaggcagaatatgagaagatatctgatatacaacgagattatgagcaacaacagtctaag
aaatcacttgaacaaggtcgagacctagaactagaggaaactcagttgtctgaatatcat
cggttaaaacaaaaggtagctgaacgaacatcacatttgtctgctgtgctagacaattta
aatcgtgagtataatgaacagaaagatttatatgatgcattgtaccgaagaaaaaatgaa
attgaaagttctttgaaacgtaaagaaactgaattaaatgaaaataaaaaacgcttgcaa
aaattattggagtatattgactcaagtaatcgtgctataaccgaacaacgtgaaacagaa
aaagctattcgggaagaagttgaattggccactagacgtattgatgaaattaatgctgag
ttagaaactgttgtttgtcagcttggtgaagcaaaagttgaacgacatgaatcatctcgt
gcagccaaaaaacaagagcttattgaaaatttaaaacgtctttttcctggagttcatggc
cgattactggaaatgtgtcaaccatcacatcgccgttatcaagtggcaattacgaaagtc
cttggtaaatatatggatgctatagtctgtgatagtgaaaaaacagctaaagagtgtatt
cagtatatgaaagatcagcgtattgaaccggagacatttttaccacttgactttttggat
gtgaagccaattgatgagaaattacgtgaaatcagtgatccacctaatgttcatttagta
attgatgttatccagtgcgatccaattatagtaaagaaggcgttaacatttgcatgtggc
aatgcattagtatgtgaaactgtcgaacatgctcgttatgttgcttatcatatgggtgat
agaaagaagactgtttcgttagaaggcactctctttcaacgttctggtgttatatccggt
ggtgcaagtgatttaaaagctcgcgctcgccgttgggatgagaaacagataagtacactt
atgtctaaacgagatgctttacaaaatgaactgaaagaacaattaaaacgtaaacgtaaa
gaagctgaattgcgaactattcagtcacaaatcaaaggtctagatactagactaaagtat
acattaaaagataaagatagcacggaagagaaacttcttagtacaaacgaagaggaaatg
aatcaaatcgctcgtgaattagaagaagttgaagaaagtttaggtcgttgccagacaaaa
atgcaggaattacaaatatcagttaatgccgaaaaagctaaaatggatactgtggaggat
actgtgtttcatgatttctgcgtacagatcggtgtagaaaacattagacaatatgaagat
cgagagttgagagttgctcgtgaacgtgatcgtaaacggcttgagtttacaaatcaactt
caaagaataaataaccaactggaatatgagcgatcacgagatactgaagcaaatgttaaa
cgttgggaagagactgtttccgttgaacgaactgaaatggataagtgtaaaaagcaggag
aaaaaaattaaggaagaaatggaacaagaagagaaaaaaaagacagaggttgaatcacgt
gtcggtgaattgaaatatcgtgcagaaatgcttgatggagaattaggtgaaattcgtaga
cgtttagtgaataaacaacgtgatattcaaaaattacagaaggatttgaatcaagccgaa
gcgaaattagaatctagacgagctgaacgtcattcacttttacaagctgctaagatggag
gatttagatttgccattgaaacaaggttgtgatccaattcctgaattgaatagtcagttg
acagatagtgaaaatatggatcctagtacagaggaaatggctcatatttatgaattggaa
gctcgtttaccggttgatttcaaacaccttgataagcctttgcgacaaatgactgatgag
aaagaagtcaatagaaaagctgaagaaatgcaaaatcaagttgattcaatgttaaatagt
ttggctcgtatacaagctccaaatttacgagcaggtgataaattaggcagtgttgaagaa
cgcctacgatcaactgaagctgaatttgaagatacacgacgtagagctaaacgagctaaa
gctagatttgaacgtgttcgtcggttacgatataatgcatttatgaattgtttcaattcc
atcgctgataatattgatccgatttataaaagtttatcaagaaatcctggtgctcaagct
agtttattaccaactaatgcagaagaaccatatttagaagagatacaatttcaatgtgtt
gcacctggtaaacgttttcaacaaatggatagtttatccggtggtgagaaaacaatagct
gcattagctctactttttgcaatgcaccgatataatccatcaccattctttgtactagat
gaaattgacgctgcattagataatacgaatattggtaaagttgccagttttatacgtgaa
tatgcttcagcacgtgcacaaattattgttatttcattgaaagaagaattctacagtcgt
gccgatagcttaattggtatttatccagatatcgaaaataattgtcttgtcagtcgtgtt
ttaagctttgatctgtcgaaatatattgataccggtgaacagtaa
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