Schistosoma haematobium (urinary blood fluke): MS3_00007342
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Entry
MS3_00007342 CDS
T05004
Name
(RefSeq) hypothetical protein
KO
K17890
autophagy-related protein 16-1
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx04136
Autophagy - other
shx04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
MS3_00007342
04136 Autophagy - other
MS3_00007342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shx04131
]
MS3_00007342
03029 Mitochondrial biogenesis [BR:
shx03029
]
MS3_00007342
Membrane trafficking [BR:
shx04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
MS3_00007342
Others
Specific organelles associated proteins
Auto phagosome
MS3_00007342
Mitochondrial biogenesis [BR:
shx03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
MS3_00007342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
ATG16
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
LSM
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
NBCH_WD40
eIF2A
Beta-prop_SCAP
RNA_pol_N
CALCOCO1
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
24590853
NCBI-ProteinID:
XP_035586896
UniProt:
A0A6A5D5R8
LinkDB
All DBs
Position
1:30889879..30908780
Genome browser
AA seq
648 aa
AA seq
DB search
MDKEGPSWKDAILTSLLERDIIEKSFFTEIFTQYDSNKDIVLYIKGENTRLVRELTLCQQ
EKSSIQLELEKIKSVKSYDYEQKVFHLQEEVTELHRQKGNLAQNVIDLNRVLQEKDTLLQ
SKSLKISELEDCLKANQVQNHHLMEKVKGLEETKELLTDEQASHLMTAKALETKNRQLED
DNLQLMKRIKALQSTVERLKNIEYDVQYRKTQETIRKNLQDAVNSTICVTDSDCSDKPLP
CKSALPRNVAVKIDANENEVNSVRFTPSGHIFGSAGFDRKLRLWTYLNGKCEIHSTLVGC
NAAVTAIDFDPNETAVLGASSDFSCRVWTLNDSRLRVNLTGHSERVISAKFMRSANRVVT
ASSDRTIKIWDVDKCCCRRTIMAASTFQDVVVCPSISALVTGHFDQHLRIWDERSGENTG
KILLSGRITGMDISSDFTTVLSCTRNNTLEIVDLRMNQVTQCLKADGFQTGLDIVRPCFS
PDSDYVAAGGHDGGVYIWSTVSGNLEICLRDHTNIVVCCHWNPNGNSLVSCERIKKAIVW
STRMPTGDKQPEKHKKESIIDLNKYIDKRIRVKFSGGREAVGILKGCDNLQNMVIDCTTE
FLRDPDDPHRLTEDTRELALVVCRGPSVELVCPADGMESIPNPFVQQE
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggagggtccttcatggaaagatgctatacttacatccctgcttgaacgtgat
attattgagaagtcattttttactgaaatttttacacaatacgactcaaataaggacatt
gtgttatacatcaagggggaaaacactcgtcttgtacgtgaattaacactatgccaacaa
gagaaatcctcaatacagctagaacttgaaaagataaagtctgtcaaatcctatgactat
gagcagaaggtgtttcatttgcaagaagaggttaccgaattgcatcgacagaaagggaac
ctcgcgcaaaatgttattgatttaaacagagttcttcaggagaaagacaccttgctccaa
tcaaagtccttgaagatttcggagttagaggactgccttaaggctaatcaagtgcagaat
catcacttgatggaaaaggttaagggactagaggaaactaaagaattgcttacagatgaa
caggcctcacacttaatgaccgcgaaggcactagaaacaaaaaacaggcaacttgaggat
gataatctgcaacttatgaaacgaataaaagccctccagtccactgtcgaaaggttgaaa
aatatagagtatgatgtgcagtatagaaaaactcaagaaacaatccgcaagaatctccaa
gatgcagtcaattcgactatatgcgttactgatagtgattgttcggacaaaccactaccc
tgtaaatctgcacttccgcgtaacgttgcagtcaaaatagatgctaatgaaaatgaagta
aatagtgttcggttcactccatcaggccacattttcggatcagcaggatttgatcgtaaa
ctccgattatggacatatctaaatggaaaatgtgaaatccattcaacccttgttggttgt
aatgctgctgtcactgccatagattttgacccaaatgaaactgctgttttaggtgcctca
agtgatttttcgtgtcgtgtatggacactaaatgattccagacttcgagtcaatttgaca
ggacattctgagcgtgttatctctgctaaatttatgaggtctgctaaccgcgttgtcact
gcttcatcagatagaacgatcaagatttgggacgttgacaagtgctgttgtaggcgtacc
atcatggctgcctccacattccaagatgtagttgtttgtccctccatatctgcgcttgtt
actggccatttcgatcagcatttacgcatttgggatgaacgatctggggaaaatactggc
aaaatcttgctctccgggcgtattactggtatggacatctcctctgatttcacaactgtt
ttatcttgtacacgtaacaacactttagaaattgtggatttacgtatgaatcaagttaca
caatgcttgaaagctgatggttttcaaacaggtttagatatagttcgaccatgcttctca
cctgactcagattatgtagctgctggtggacatgatggtggagtttatatttggagcaca
gtttcaggaaatttagaaatttgtctccgtgaccacacaaatattgtcgtttgttgtcat
tggaatccgaatggtaattctctagtttcatgtgaacgtattaagaaagcaattgtctgg
tctacgagaatgcctactggagataaacaaccggaaaagcataagaaagagtctataatt
gatttaaacaagtatatagataaaagaatccgtgtcaaattttcaggtggacgggaagct
gttggtatcttgaaaggatgcgataatttacagaatatggtgattgattgtactactgaa
tttcttcgtgatccagatgatcctcatcgtttgactgaagatacaagagaactcgccctt
gtggtttgtaggggtccatccgtggaacttgtttgtcctgcagatggaatggaatctata
cctaatccatttgttcaacaagaatga
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