Schistosoma haematobium (urinary blood fluke): MS3_00007730
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Entry
MS3_00007730 CDS
T05004
Symbol
PAN3_1
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit 3
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Pathway
shx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MS3_00007730 (PAN3_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shx03019
]
MS3_00007730 (PAN3_1)
Messenger RNA biogenesis [BR:
shx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MS3_00007730 (PAN3_1)
mRNA degradation factors
3'-5' decay
Pan complex
MS3_00007730 (PAN3_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Motif
Other DBs
NCBI-GeneID:
75577700
NCBI-ProteinID:
XP_051066609
UniProt:
A0A094ZPY2
LinkDB
All DBs
Position
4:25168269..25188580
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AA seq
804 aa
AA seq
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MTSNYVHGGSGIQNSMLSCTLKNLSLGSNQLTQMNDQTNSMCMTPPATQMNFLRPIPGAS
SEAVFLSTHRPASGRTLGIADFLSLNTTSTNRPSVLSTVSISKASPAPQNGQSTRAPERV
ALTSKAVVPGNHGFASMLRPRGPGVSSSRVLSNLPDSRQIPSNSEICSSFFSNRFGGTAS
DSLTTDRINHPTVTHSNSPTSAFDNMLTSPHSFENFLPPNLRQLTQPGQSHIQNSSGSSL
NSCHSDTPLPPEMRPDTHLTPFSDSQCVLPITASQFYSSHHFENTKKLQASGSLKVAPWI
LVPPVPEGTAAHMRTGRVHEAKPNLFNNPAFGPIIIDDDFKHALHSKLQACLFMADESIK
EKLPRNLGAYTDLVPLEILDQPRVSVTFGLPGVCFKAWSPRFSRYMLLRRIILPPDHEAA
LSSDAFYLAKQLSDLNHSAVVGFRDVFFTDAFADNSVILVYEYIPCSSTLQQIHMSDPLK
LTSFTSPFSIGRTVLPHSAIKSAPSDLGMPHESVMWSYLIQLTSGLRFIHQTFHRSCGIL
DPTKVLLQDGPRLRINCFGLKDILFYSAQDTNLVESQAADFIQLGKLMIGVACGTVAAVQ
ASQRASSFNLLQRAYRPELVTLIRSLVSGQISGADQLMRATAPFAFNHLTRLYDHSDLLE
SQLLLELECDRLFRLICKLQSIVERCDQGTSPEWSETGDRYMLKLFRDFVFHQSDPLGAP
YLDLAHIITTLNKVEAASPERLCLVSRDSQNVIIVTYADIKQWLDTSFSYLVDKHRQSQC
ELQLTRQRNARQQQQEISNPGSQQ
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaactacgttcatggtggttcaggaatccagaacagtatgctttcgtgcact
ttgaaaaatctgtcactcgggtccaatcaacttactcagatgaatgatcaaactaactcg
atgtgtatgactccaccggctacacaaatgaattttcttcgtcctattcctggtgcatct
agtgaggctgtcttcctaagcacacatcgtccagcttctggccgtacgttggggatagcg
gatttcctttcgctgaataccacttccactaacagaccctctgtattgtccactgtatct
atttcgaaagcatcacccgccccacaaaatggacagtcgacgagagctcctgaaagggtg
gctttaacatcaaaagcggtagtcccgggaaaccatggatttgccagcatgctccgtccc
cgaggtcctggtgtttcttcttctcgtgtcctttccaacttaccagatagccggcagatc
ccgtcaaactctgagatttgttcatccttcttctctaatcgatttggcggcacagccagc
gacagtcttacaacggatagaataaatcatccaaccgtcactcactctaactcacctaca
tctgcatttgacaatatgttgacctctccacattcgtttgaaaattttctaccaccgaat
ttaagacagctaacacagcctggacaatctcatatacaaaattcatcaggttcctcacta
aactcctgtcattctgacactccattgcctcccgaaatgcgacctgacactcacctcacc
cctttcagtgactcccagtgtgttcttcccattactgcctctcaattctattccagtcat
cattttgaaaatactaaaaaactccaggcctctggtagccttaaagtcgctccttggatt
cttgtcccaccagttcctgagggcactgcagctcatatgagaacaggaagagttcatgaa
gctaagccaaacttgttcaacaaccctgcatttggtcccatcataattgatgatgacttc
aagcacgcactgcacagtaaacttcaagcttgcttgttcatggctgatgagtccataaag
gaaaaattacctcgcaacctaggagcttacactgacctcgttcctctagaaattttagat
caaccaagagtatcagttacatttggccttcctggagtctgttttaaagcttggtctcct
cgatttagtcgatatatgcttcttcgacgcataattttaccacctgatcatgaagcagct
ctatcatctgatgctttttatttagctaaacaactatctgatttaaatcattctgctgtt
gttggatttcgggatgtatttttcactgatgcatttgctgataactcggttatcctggtt
tatgaatacataccttgttcatcaactctacaacaaattcatatgagtgatccattgaaa
ctaactagttttacttcgcctttcagtattggtcgtacagtgttacctcatagtgccata
aaaagtgctccatctgatctcggaatgcctcatgagtctgttatgtggtcatatttaatt
caattaaccagtggtttgcgttttattcaccaaacatttcaccgatcatgtggtatactg
gatcctactaaagtgttattacaagatggaccgcgtttgcgaatcaattgtttcggttta
aaggatattctgttctattctgcacaagataccaatttagtagaaagtcaggcagctgac
tttatacaacttggcaaattaatgataggagttgcttgtggtacagttgcagctgtacag
gctagtcaacgggcttcttcattcaacctacttcagcgtgcataccgaccagaattagtc
actcttattcgaagtttagtatcaggacagatatcaggagcagatcaactaatgcgggct
actgcaccatttgcattcaatcacctaacacggttatatgatcattcagatctcttggaa
agtcaattattattggaactggaatgtgacagacttttccgactcatctgtaaacttcaa
tctattgtggagcgttgcgatcagggtacttccccagaatggtctgaaacaggtgatcgt
tatatgttgaaattatttcgagatttcgtatttcaccaatctgatcctcttggtgctcca
tacttagatcttgcacatattattactacattgaacaaggttgaagctgcttcacccgaa
cgtctttgtctagtcagccgtgatagtcaaaatgtgattattgtcacctatgcagatatt
aaacaatggttagatacaagtttttcttatctagtggataaacatcgtcagagtcaatgt
gaactacaattgacacgtcaacgaaatgctcgccaacaacaacaggagatctccaatccc
ggaagtcaacaatga
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