Schistosoma haematobium (urinary blood fluke): MS3_00008042
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Entry
MS3_00008042 CDS
T05004
Symbol
SSRP1
Name
(RefSeq) FACT complex subunit ssrp1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
shx
Schistosoma haematobium (urinary blood fluke)
Brite
KEGG Orthology (KO) [BR:
shx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shx03000
]
MS3_00008042 (SSRP1)
03036 Chromosome and associated proteins [BR:
shx03036
]
MS3_00008042 (SSRP1)
Transcription factors [BR:
shx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
MS3_00008042 (SSRP1)
Chromosome and associated proteins [BR:
shx03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
MS3_00008042 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
24593185
NCBI-ProteinID:
XP_012797175
UniProt:
A0A6A5DGC1
A0A095C5Z7
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All DBs
Position
4:39472284..39482366
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AA seq
720 aa
AA seq
DB search
MLDKAFPLVTWCGCMTELLQLGGLKWRLILLKVISFKQMADIAFDHITQEVRGTVYPGKL
RLKEDEFMYKNEKTGKVDHFSRSDIESAQWIVRATGLGLSIKLKNNSLHRYDGFGEIEAE
KVGSFFKKYFDVEIVKRELCYKGYNWGDVDFDGDVLEFSVKNAMAFEVPLSNVANAVLNK
NEIIFEFHLNDEAEVCLSEMRLYTPGTEADREGKAPSIYSKVTQKADIIQVTGDFLVEFK
QLQCLQPRGRYDVKLYPSFIHLHGKSYDFKVPKNTITRLMVLPHPDNRQIFFAVQLDPPI
KHGQTRYHFVISLFDKDSHINLEMAATEDWLQEQFNGKLTRNISGPEYEVVARVFKVLFD
QKVTVPGSFSAKGGGCAVACSYKASVGLLYPLERGFTFVPRPPISIRFDEIVAVQFSRGT
GAQRSFDFEVETRNGLTHTFTSIERDEYHHLYDFVTAKKLRVKNISSENKTTNPGDDVWS
SSDESHDAYMEKVKTEARERTTEMDDEDDDDEDDEDFKPPESDGSELAEEYDSNVQTTTS
EDESGDNDDDDDSEENKSNTSSKNTTTHKKKDKRDNDSDGYEDSLSSVSSTSEPKPKQKK
LKEEPKKSTTKPRKDETKRQTTKKQKKPKDPNAPTRPLSAYFLWFNENREKIAKTLDGQN
SVAEVAKAAGEIWRNMDSTEKSGYQSRVDELKKKYQEDLRIYQSNLASSKEPDLSPDSSS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttggacaaggcgtttccactcgtgacctggtgcggatgcatgaccgagctccttcag
ctaggtggactgaagtggaggcttattcttctcaaggtcatcagcttcaagcagatggcg
gatatagccttcgatcatataactcaggaggttaggggtactgtatatccgggtaagctt
cgactcaaagaagatgagtttatgtataaaaacgaaaagactggaaaggtggatcacttc
tcccggtcagatatagagtcagcccaatggatagtccgtgctactggtttaggattaagc
ataaagttaaaaaataactctttgcatcggtatgatggctttggtgaaatcgaagcggaa
aaggtcgggagctttttcaagaagtatttcgacgttgaaattgtaaagcgtgaactgtgc
tacaaaggctacaattggggagacgtggatttcgatggcgatgttctcgagttttcagtt
aaaaacgccatggctttcgaggttcctctaagcaatgttgcaaatgctgttttgaacaaa
aacgagattattttcgaatttcacctaaatgatgaagctgaagtttgcttatctgaaatg
cgtctgtacactccgggaactgaagctgatagggaaggcaaagccccttctatatattcc
aaggttactcaaaaggcagatattattcaggttacgggagatttcttggtcgaattcaaa
cagttgcagtgtcttcaacctcgtggccgttatgatgttaaattatatccaagttttatc
catttgcatggcaagtcttacgactttaaagtcccaaagaatactattactcggttgatg
gtgcttcctcatcccgataatcggcagatattctttgcagttcaacttgatccaccgatc
aaacatggtcaaaccagatatcattttgtgatttcccttttcgacaaggattcgcacata
aacttggaaatggctgcgacagaagactggcttcaggagcagttcaatggaaaattaact
cgaaatatttcaggacctgaatatgaagttgtagctcgcgtgttcaaggttctatttgat
cagaaagttacagtcccaggaagcttctctgcaaaaggcggtggttgtgcagttgcatgc
agttataaagcgtctgttggtttgttgtatccattagagagaggttttacattcgttcct
cgtcctccaatttctatacgtttcgatgaaatagtagctgtacaattttcccgcgggacg
ggtgctcaaaggtcttttgattttgaggtggaaactcgtaatggtttaacgcatacattc
acttctatcgaaagagatgaatatcatcatttgtacgattttgtaactgctaaaaaactt
cgtgttaaaaatatcagttcagaaaacaaaactactaatcctggtgatgacgtttggtca
tcatctgatgaatcacatgatgcttacatggagaaggtaaagacagaagctcgagaacga
acaactgaaatggatgatgaagatgacgacgatgaagatgatgaagatttcaaaccaccg
gaatctgatggttctgaacttgcagaagaatatgatagtaatgttcaaacaacaacaagt
gaagatgaatctggagacaacgatgatgatgatgattcggaggagaacaaaagtaacact
agtagtaagaatactactacacacaagaaaaaagataaacgagacaatgatagtgatgga
tatgaagacagcttgtcaagtgtaagcagtactagtgaacctaaaccaaaacaaaaaaaa
ttgaaagaagaaccaaagaaatcaacaactaaaccccgtaaagatgaaacaaaacgacaa
acaacaaaaaagcaaaaaaaacctaaagatcctaatgcaccaactcgtccactttctgct
tatttcttatggtttaatgagaatagagagaaaattgcaaaaactttagatggacaaaat
tctgttgctgaagtagctaaagctgctggagagatttggcgaaatatggatagtacagaa
aaatcaggttatcaatcaagagttgatgaattaaaaaagaaatatcaagaagatttacgt
atatatcaatcaaatttagcgtcttctaaagaaccagatttatcaccagattctagtagt
taa
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