KEGG   Schistosoma haematobium (urinary blood fluke): MS3_00008308
Entry
MS3_00008308      CDS       T05004                                 
Symbol
TCEB1
Name
(RefSeq) Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
  KO
K03872  elongin-C
Organism
shx  Schistosoma haematobium (urinary blood fluke)
Pathway
shx04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:shx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MS3_00008308 (TCEB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shx04121]
    MS3_00008308 (TCEB1)
   03400 DNA repair and recombination proteins [BR:shx03400]
    MS3_00008308 (TCEB1)
Ubiquitin system [BR:shx04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     MS3_00008308 (TCEB1)
   Cul5 complex
     MS3_00008308 (TCEB1)
DNA repair and recombination proteins [BR:shx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     MS3_00008308 (TCEB1)
SSDB
Motif
Pfam: Skp1_POZ
Other DBs
NCBI-GeneID: 24588692
NCBI-ProteinID: XP_051065263
UniProt: A0A094ZG55
LinkDB
Position
6:complement(2671361..2674460)
AA seq 118 aa
MTEVQSSAGAEQKYGGAEGADAMYVKLVSSDDHEFYVRREHALTSGTIKAMLSGPGQFQE
NETNVVHFREIPSHVLQKVCSYFAYKVRYTNSSSEIPEFPIAPEISLELLMAANFLDC
NT seq 357 nt   +upstreamnt  +downstreamnt
atgactgaggttcagtcgagtgctggtgcagaacaaaagtatgggggtgctgaaggggca
gatgctatgtatgtaaagctcgtatcgtcagacgaccatgagttctacgtccgtcgagag
catgctcttacgagtggtaccataaaagcaatgctttcaggtccaggtcaatttcaagag
aatgaaacaaatgttgtacattttcgtgaaataccatcacatgtattacaaaaagtatgc
agttatttcgcttataaagtacgttatacaaatagttcaagtgaaataccagaatttcct
attgctcctgaaatttcattagaattattaatggctgctaattttttagattgttaa

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